European Journal of Soil Science, 2010 doi: 10.1111/j.1365-2389.2010.01301.x
Soil properties prediction of western Mediterranean
islands with similar climatic environments by means
of mid-infrared diffuse reflectance spectroscopy
L. P. D’Acqui
a
, A. Pucci
a
& L. J. Janik
b
a
Istituto per lo Studio degli Ecosistemi, Consiglio Nazionale delle Ricerche - Via Madonna del Piano 10, 50019 Sesto Fiorentino
(Firenze), Italy, and
b
Commonwealth Scientific and Industrial Research Organisation - Land & Water, PMB No 2, Glen Osmond, SA
5064, Australia
Summary
This study investigated the suitability of mid-infrared diffuse reflectance Fourier transform (MIR-DRIFT)
spectroscopy, with partial least squares (PLS) regression, for the determination of variations in soil properties
typical of Italian Mediterranean off-shore environments. Pianosa, Elba and Sardinia are typical of islands
from this environment, but developed on different geological substrates. Principal components analysis
(PCA) showed that spectra could be grouped according to the soil composition of the islands. PLS full
cross-validation of soil property predictions was assessed by the coefficient of determination (R
2
), the root
mean square error of cross-validation and prediction (RMSECV and RMSEP), the standard error (SECV
for cross-validation and SEP for prediction), and the residual predictive deviation (RPD). Although full
cross-validation appeared to be the most accurate (R
2
= 0.95 for organic carbon (OC), 0.96 for inorganic
carbon (IC), 0.87 for CEC, 0.72 for pH and 0.74 for clay; RPD = 4.4, 6.0, 2.7, 1.9 and 2.0, respectively),
the prediction errors were considered to be optimistic and so alternative calibrations considered to be more
similar to ‘true’ predictions were tested. Predictions using individual calibrations from each island were the
least efficient, while predictions using calibration selection based on a Euclidian distance ranking method,
using as few as 10 samples selected from each island, were almost as accurate as full cross-validation for
OC and IC (R
2
= 0.93 for OC and 0.96 for IC; RPD = 3.9 and 4.7, respectively). Prediction accuracy for
CEC, pH and clay was less accurate than expected, especially for clay (R
2
= 0.73 for CEC, 0.50 for pH and
0.41 for clay; RPD = 1.8, 1.5 and 1.4, respectively). This study confirmed that the DRIFT PLS method was
suitable for characterizing important properties for soils typical of islands in a Mediterranean environment
and capable of discriminating between the variations in soil properties from different parent materials.
Introduction
A detailed study of the role of many soil physical, chemical and
biological properties in terrestrial ecosystems demands less expen-
sive and faster data acquisition techniques to quantify the different
soil properties. This is especially true for precision agriculture and
other applications where precise spatial resolution of soil prop-
erties is required. Recent studies have shown the possibility of
using infrared reflectance spectroscopy and multivariate chemo-
metrics in order to obtain qualitative and quantitative assessment
of some chemical and physical parameters of the soil rapidly and at
low cost (Janik & Skjemstad, 1995; Reeves et al., 2001; Viscarra
Rossel et al., 2006; Minasny et al., 2008; Du & Jianmin, 2009).
Correspondence: L. P. D’Acqui. E-mail: dacqui@ise.cnr.it
Received 15 September 2009; revised version accepted 17 August 2010
Infrared spectroscopy is associated with the vibrations of molec-
ular functional groups, enabling the identification of specific soil
chemistry. Samples for infrared soil analysis are usually scanned
as dry powdered samples. The intensity loss of diffusely reflected
infrared radiation at specific frequencies from the sample surface
is measured and the resulting spectra correlated with soil proper-
ties using a multivariate regression method such as partial least
squares (PLS) regression modelling. While sample dispersion in a
non-absorbing inert matrix, such as powdered potassium bromide,
is often required to give spectral absorbances closely related to
soil component concentrations, the use of neat, powdered sam-
ples for Diffuse Reflectance Fourier Transform Infrared (DRIFT)
analysis reduces sample preparation time and weighing errors and
thus speeds up analyses. Unfortunately, however, DRIFT intensi-
ties for powdered samples, such as soils, can be very non-linear
© 2010 The Authors
Journal compilation © 2010 British Society of Soil Science 1