FULL PAPER
Synthesis, X‐ray characterization and density functional
theory studies of N
6
‐benzyl‐N
6
‐methyladenine–M(II)
complexes (M = Zn, Cd): The prominent role of π–π,C–H···π
and anion–π interactions
Roser Pons
1
| Cristina Ibáñez
1
| Ana B. Buades
1
| Antonio Franconetti
1
| Angel Garcia‐Raso
1
|
Juan J. Fiol
1
| Angel Terrón
1
| Elies Molins
2
| Antonio Frontera
1
1
Departament de Química, Universitat de
les Illes Balears, Crta de Valldemossa km
7.5, 07122 Palma de Mallorca (Baleares),
Spain
2
Institut de Ciència de Materials de
Barcelona (ICMAB‐CSIC), Campus
Universitat Autònoma de Barcelona,
08193 Cerdanyola, Spain
Correspondence
Angel Garcia‐Raso and Antonio Frontera,
Departament de Química, Universitat de
les Illes Balears, Crta de Valldemossa km
7.5, 07122 Palma de Mallorca (Baleares),
Spain.
Email: angel.garcia‐raso@uib.es; toni.
frontera@uib.es
We report the synthesis and X‐ray characterization of the N
6
‐benzyl‐N
6
‐
methyladenine ligand (L) and three metal complexes, namely [Zn(HL)
Cl
3
]·H
2
O(1), [Cd(HL)
2
Cl
4
](2) and [H
2
L]
2
[Cd
3
(μ‐L)
2
(μ‐Cl)
4
Cl
6
]·3H
2
O(3). Com-
plex 1 consists of the 7H‐adenine tautomer protonated at N3 and coordinated
to a tetrahedral Zn(II) metal centre through N9. The octahedral Cd(II) in
complex 2 is N
9
‐coordinated to two N
6
‐benzyl‐N
6
‐methyladeninium ligands
(7H‐tautomer protonated at N3) that occupy apical positions and four chlorido
ligands form the basal plane. Compound 3 corresponds to a trinuclear Cd(II)
complex, where the central Cd atom is six‐coordinated to two bridging μ‐L
and four bridging μ‐Cl ligands. The other two Cd atoms are six‐coordinated
to three terminal chlorido ligands, to two bridging μ‐Cl ligands and to the
bridging μ‐L through N3. Essentially, the coordination patterns, degree of pro-
tonation and tautomeric forms of the nucleobase dominate the solid‐state
architectures of 1–3. Additionally, the hydrogen‐bonding interactions produced
by the endocyclic N atoms and NH groups stabilize high‐dimensional‐order
supramolecular assemblies. Moreover, energetically strong anion–π and lone
pair (lp)–π interactions are important in constructing the final solid‐state archi-
tectures in 1–3. We have studied the non‐covalent interactions energetically
using density functional theory calculations and rationalized the interactions
using molecular electrostatic potential surfaces and Bader's theory of atoms
in molecules. We have particularly analysed cooperative lp–π and anion–π
interactions in 1 and π
+
–π
+
interactions in 3.
KEYWORDS
Cd(II)–cytokinin complex, cytokinin, DFT calculations, noncovalent interactions, Zn(II)–cytokinin
complex
Received: 31 January 2019 Revised: 17 February 2019 Accepted: 20 February 2019
DOI: 10.1002/aoc.4906
Appl Organometal Chem. 2019;e4906.
https://doi.org/10.1002/aoc.4906
© 2019 John Wiley & Sons, Ltd. wileyonlinelibrary.com/journal/aoc 2 of 11