ANTIFUNGAL ACTIVITY OF ENDOPHYTIC FUNGI ISOLATED FROM LANNEA COROMANDELICA–
AN INSILICO APPROACH
Original Article
N. PREMJANU
a*
, C. JAYNTHY
b
, S. DIVIYA
b
a
Department of Biochemistry, Dental College and Hospital, Sathyabama University, Chennai,
b
Department of Bioinformatics, Sathyabama
University, Chennai
Email: janu6kishore@gmail.com
Received: 24 Oct 2015 Revised and Accepted: 30 Mar 2016
ABSTRACT
Objective: The objective of this research was to isolate endophytic fungi from Lannea coromandelica having antifungal activity potential and to
isolate the secondary metabolite from the dominant fungi and predict the probable mechanism behind its activity.
Methods: The endophytic fungi were isolated from leaves of Lannea coromandelica by surface sterilization method. Then fungal biomass was
extracted for intracellular metabolites by using ethyl acetate as solvent. The crude extract was filtered, and the filtrate was dried under vacuum at
40 °C. The filtrate was analysed for antifungal activity. The fungi which showed the maximum activity was identified and the metabolite present in
the ethyl acetate extract was characterized and identified by GC-MS (Gas-Chromatography Mass-spectrophotometry) analysis. Further, these
compounds were docked against the target protein Lanosterol 14-alpha demethylase to unravel and predict the probable mechanism behind the
antifungal activity of secondary metabolite.
Results: Aspergillus flavus, Aspergillus niger, Alternaria alternata and Colletotrichum gloeosporioides were isolated and identified based on their
morphological features as endophytic fungi. Among the four dominant fungi, the antifungal activity of Aspergillus flavus showed the maximum
activity with an inhibitory zone of 26.22 mm against Candida albicans and 16.72 mm against Malassezia pachydermis. Further, the secondary
metabolite was identified by GC-MS (Gas-Chromatography Mass-spectrophotometry) () analysis and found to be Kojic Acid, Octadecanoic acid, n-
Hexadecanoic Acid, diethyl Phthlate, 3-Phenyl Propionic Acid. These compounds were docked with the target protein and were able to bind at an
active site similar to that of Flucanozole a known inhibitor.
Conclusion: The finding of this work clearly indicates that the metabolite produced by the endophytic fungus could be used as an alternative source
of antifungal agents against clinical pathogens.
Keywords: Endophytic fungi, Secondary metabolite, Antifungal activity
© 2016 The Authors. Published by Innovare Academic Sciences Pvt Ltd. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/)
INTRODUCTION
In the last 15 y, there has been an alarming increase in life-
threatening systemic fungal infections of varying types which are
observed in immunosuppressed/immunocompromised person such
as AIDS, cancer, and transplant patients. Candida sp. have emerged
as significant pathogens in recent decades as a consequence of
increasing numbers and population of immunocompromised
patients [1]. As a result, they have become a major direct cause of
death in patients being treated for malignant diseases and emerging
immune deficiency diseases [2]. Management of fungal infections
have become more complex due to lack of a number of effective
antifungal drugs, problems of drug safety, side effects, resistance and
effectiveness of drug forms [3]. Therefore, there is an urgent need to
improve currently used drugs, to design new drugs and to explore an
alternate source of novel drugs through various mechanisms, for
better treatment
Endophytic fungi are a group of microorganism colonized in inter
and intracellular host plants without causing any disease, plays
important physiological roles and ecological roles [4]. After
colonization many fungal endophytes may occupy a large area
relatively and create an obstacle for other endophytic species by
competing [5] or by producing antagonistic metabolites [6, 7]. After
the discoveries of endophytes which reside in unique biological
niche that is intracellular cells of the plants, created a worldwide
curiosity among scientist which led to isolation of endophytes and to
study their natural products. It has been observed that plants
harbour a myriad of endophytes, possessing enormous metabolic
diversity and diverse bioactive compounds that can be used as a
therapeutic agent against emerging human diseases such as cancer
and infectious diseases [8, 9]. It has been reported that mainly the
filamentous fungi, are capable of producing a large number of
chemically different secondary metabolites [10], which possess
diversified functions and can be used as antimicrobials, antifungal
and antivirals. These metabolites have high chemical diversity which
comprises of alkaloids, terpenoids, quinones, peptides, xanthones
and phenols [4]. Due to the presence of the above-mentioned
properties, it may provide numerous lead compounds for the
development of new drugs, directly, or as an inspiration for
synthetic drugs [8]. A considerable body of research has investigated
the diversity, ecological role, secondary metabolites and bioactivity
of the endophytic fungi isolated from various medicinal plants [11].
One such plant studied is Lannea coromandelica, which is commonly
known as “The Indian Ash Tree” belonging to the Anacardiaceae
family. The bark and leaves of this tree have been used to treat
various aliment by villagers and tribal people. Lannea coromandelica
is considered to have antimicrobial, antifungal and antiviral
properties [12]. Apart from this, it is claimed to have anti-
inflammatory, zoosporicidal, tissue healing, and tissue regeneration
capacity. It is also used in the treatment of skin diseases, injuries,
diarrhoea, particularly in young children, ulcers, impotence, vaginal
troubles, heart diseases, gout, rheumatism, sore eyes, dysentery, and
as an antidote in coma caused by the narcotics [13-15].
In this study an attempt was made to investigate and identify the
antifungal metabolite produced by the fungal endophytes by GC-MS
(Gas-Chromatography Mass-Spectrophotometry) analysis. Further
studies were carried out to evaluate the interactions of metabolites
present in the ethyl acetate extract of Aspergillus flavus by using In
silico docking method for antifungal analysis with Lanosterol 14-
alpha demethylase as target protein. Our study dealt with the
assessment of the interactions between ligands and target protein
by molecular docking method in order to calculate the minimum
binding energy (kcal/mol) between them.
International Journal of Pharmacy and Pharmaceutical Sciences
ISSN- 0975-1491 Vol 8, Issue 5, 2016