Plant Science Today, ISSN 2348-1900 (online)
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Received: 04 May 2022
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CITE THIS ARTICLE
Unamba C I N, Agbagwa I O. Utilization of
conserved genic SSR markers for phylogenet-
ic analysis of Nigerian Ipomoea species. Plant
Science Today (Early Access).
https://doi.org/10.14719/pst.1875
Abstract
Ipomoea, with enormous economic importance, is a large genus with spe-
cies that are highly evolutionarily diverged. There is dearth of information
regarding the phylogenetic relationships of the Nigerian species of the ge-
nus Ipomoea. It is therefore imperative to use contemporary taxonomic evi-
dences to understand the diversity of its distribution in a region and provide
enhanced delimitation of the taxa. In this study, 6 genic simple sequence
repeat (SSR) markers whose cross transferability have been established
among the plant species were selected to appraise their level of polymor-
phism and used to study the phylogenetic relationships among 11 indige-
nous Nigerian Ipomoea species. The 6 SSR loci showed varying levels of pol-
ymorphism among the genotypes of all 11 species assessed and demon-
strated 100% polymorphism when examined across the 11 species. A total
of 55 alleles were produced. The PIC of the primers ranged between 0.2223
and 0.874 with an average value of 0.71885. Phylogenetic analysis clustered
species into 3 major and 6 sub clusters wherein the species were clearly sep-
arated. This study has shown the efectiveness of developed genic SSR
markers for establishing phylogenetic relationship in Ipomoea species.
Keywords
SSR Markers, Genic, Phylogenetics, Ipomoea, Conserved
Introduction
The genus Ipomoea, belonging to the family Convolvulaceae is widely dis-
tributed in the tropic and subtropic regions. The genus comprises of species
which are annual and perennial herbs, vines, shrubs and even small trees
(1-4). A striking morphological characteristic of the Convolvulaceae family,
is twining or climbing woody or herbaceous plants ofen having heart -
shaped leaves and funnel-shaped flowers (5). The genus is known anatomi-
cally with the existence of cells, which secrete resin glycosides in the foliar
tissues and the roots. These glycoresins are a key chemotaxonomic marker
of this family (6) and are implicated for the purgative characteristics of some
species of the Convolvulaceae (7).
Several species of Ipomoea are used as ornamental plants, food or
medicines. Interestingly, antimicrobial, analgesic, spasmolitic, spasmogen-
ic, hypoglycemic, hypotensive, anticoagulant, anti -inflammatory, psychoto-
mimetic and anticancer activities were reported in number of the species
(8).
Examining the relationships among a group of closely related organ-
isms to settle on their evolutionary history is core objectives in systematic
RESEARCH ARTICLE
PLANT SCIENCE TODAY
ISSN 2348-1900 (online)
Vol x(x): xx–xx
https://doi.org/10.14719/pst.1875
HORIZON
e-Publishing Group
Utilization of conserved genic SSR markers for phylogenetic
analysis of Nigerian Ipomoea species
Chibuikem I N Unamba
1,2 *
& Ikechukwu O Agbagwa
2
1
Department of Plant Science and Biotechnology (Botany), Imo State University, 460222 Nigeria
2
Department of Plant Science and Biotechnology, University of Port Harcourt, 500004 Nigeria
*Email: chibuikem.unamba@gmail.com