Nanometer-scale Electron Microscopy of proteins in liquid
Utkur Mirsaidov,* Haimei Zheng,*** Yosune Casana**, Paul Matsudaira,**
* MechanoBiology Institute-Singapore, National University of Singapore, 5A Engineering Drive 1, Singapore,
117411. ** Center for Bioimaging Sciences, Department of Biological Sciences, National University of
Singapore, Science Drive 4, Singapore, 117543. *** National Center for Electron Microscopy, Lawrence
Berkeley National Laboratory, Berkeley, CA 94720
While cryo-electron microscopy is predominantly used to study structure of proteins and other biological
materials it lacks the ability to capture phenomenon under physiologically relevant conditions. Light
microscopy, on the other hand is commonly used tool for live imaging but it is diffraction limited with
resolution of about 50 nm. Ability to image proteins with nanometer resolution in aqueous state and at room
temperature is an overarching goal of biological imaging. Towards this goal we have developed a technique that
enabled us to image thin solution layer of actin bundles by encapsulating them between electron transparent
windows with 2 nm. The solution of acrosomal bundle is loaded into a liquid chamber with a 300 nm gap
between two identical 10 nm thick electron transparent Si3N4 windows and inserted inside the column of 120
keV TEM as shown in Figure 1 [1].
The resolution limit both for 100 keV and for 400 keV cryo-electron microscopy for acrosmal bundles
have been previously established to be around 2.7 and 0.7 nm [2, 3]. In similar manner from numerous electron
images we estimated our resolution to be ~2.7 nm for aqueous protein sandwiched between two 10 nm thick
Si3N4 windows. Reducing the window thickness will further improve the resolution and contrast of the images.
Radiation damage caused by high energy electrons is a drawback of any electron microscopy technique and has
been a concern for many years. Radiation damage to a structure of a sample exhibits itself by alteration or
destruction of protein structure. We have previously reported that tolerable dose, D1/e, the dose at which
amplitudes of Fourier peak in periodic structure drops by a factor of e, for acrosomal bundle to be around 25
eV/A
2
for 400keV at cryogenic temperatures[4]. We find the tolerable dose to be D1/e (293K)= 35 e/A
2
for the
case of proteins in aqueous environment at room temperature. This seemingly enhanced resistance to radiation
damage contradicts previous reports on the effect of temperature on radiation damage being at least 10 times
worse at room temperature compared to cryogenic conditions[5]. But nevertheless our results on their own merit
suggest that aqueous imaging of proteins is possible without any adverse effect of temperature. In conclusion our
study shows that that aqueous TEM can be used to study proteins with nanometer resolution in situ. We also find
that the radiation damage is not any more severe at room temperature that at cryogenic temperatures.
References
[1] H. Zheng et al., Science 324(2009) 1309.
[2] M. Schmid, et al., J. Mol. Biol. 221(1991) 711.
[3] M. Schmid, et al." J. Mol. Biol. 230(1993) 386.
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doi:10.1017/S1431927611001474
Microsc. Microanal. 17 (Suppl 2), 2011
© Microscopy Society of America 2011
https://doi.org/10.1017/S1431927611001474
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