A DFT and CASSCF Study of Photocycloaddition Reactions of
Biradicals from 6-Amino-2-(3-thienoyl)-1,4-benzoquinone
Gitanjali Sharma,
1
Ignatious Abraham,
1
Ram T. Pardasani,*
1
Prasad V. Bharatam,
2
and Tulsi Mukherjee
3
1
Department of Chemistry, University of Rajasthan, Jaipur-302 055, India
2
Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research (NIPER),
Sector-67, Mohali-160 062, India
3
Chemistry Group, Bhabha Atomic Research Centre, Mumbai-400 085, India
Received April 1, 2009; E-mail: rtpardasani@gmail.com
DFT-B3LYP and CASSCF calculations have been performed using a 6-31G* basis set to study photocycloaddition
reactions of biradicals, generated by irradiation of 6-amino-2-(3-thienoyl)-1,4-benzoquinone, with ethylene. The
calculated parameters of biradicals and transition states have also been compared with ground state parameters to
completelyelucidate the reaction mechanism of [2 + 2] and [3 + 2] photocycloaddition reactions. Preference for a
particular cycloaddition pathway is ascertained by the relative stability between initially formed triplet biradical and
another triplet biradicalformed by hydrogen shift.
Biradicals or biradicaloid species derived from quinones
present fascinating chemistry.
1
Photochemical [2 + 2]- and
[3 + 2]-cycloaddition reactions of quinones present very useful
synthetic methods for preparing four-membered and five-
membered rings respectively.
2,3
Diverse medicinal and bio-
logical properties
4,5
of 1,4-benzoquinones make them highly
suitable substrates for such cycloadditions. A number of
[2 + 2] photocycloaddition reactions which lead to oxetane
species have been reported.
6,7
Recently Marminon et al.
8
have
reported one-pot [3 + 2]-cycloaddition reaction of 1,4-benzo-
quinone and benzyl azide whereas Murphy and Neville
9
have
carried out comparative study of [2 + 2] and [3 + 2] cyclo-
addition reaction of 1,4-benzoquinone with allylsilane.
Density functional methods provide detailed electronic
structure of biradical generating species like 1,4-benzoqui-
nones.
10-14
Most of these studies are limited to understanding
the electronic structure of species rather than understanding the
mechanism of the reaction. In previous papers we have reported
exhaustive theoretical studies on a wide variety of thermal
and photochemical cycloadditions which principally include
the stereochemical course of [3 + 2]-cycloaddition reactions
of azomethine ylides
15-17
and theoretical aspects of [4 + 2]
cycloadditions
18,19
of hetero-1,4-benzoquinones. Encouraged
by these results we have focused our attention on a comparative
study of [2 + 2] and [3 + 2] photocycloaddition reactions of
6-amino-2-(3-thienoyl)-1,4-benzoquinone. The results are pre-
sented herein.
Computational Details
All the calculations have been carried out using Gaussian98
20
and MOPAC6
21
suites of programs. Harmonicvibration frequen-
cies of all stationary points have been computed to characterize
them as energy minima (all frequencies are real) or transition states
(one and only one imaginary frequency). The molecular and
transition state geometries for the reaction of 6-amino-2-
(3-thienoyl)-1,4-benzoquinone, through various possible path-
ways, [3 + 2]/[2 + 2], with ethylene have been located using
CASSCF and B3LYP methods, with a 6-31G* basis set. The active
space used in the CASSCF calculations isdiscussed in detail at
appropriate places in the succeeding section. Intrinsic reaction
coordinate calculations have been carried out using B3LYP/
6-31G* level on one of the transition states to confirm the reaction
path. In the B3LYP calculations of an open shell system, spin
unrestricted formalization has been used. For all the minima on the
singlet potential energy surface, the calculated (s
2
) values are close
to 1.0, so they are pure singlet biradicals, the triplet stationary
points have (s
2
) values close to 2.0 as expected.
Results and Discussion
The first task was to choose a model quinone. Literature
survey revealed that aminobenzoquinone moiety is a compo-
nent of the molecular framework of several natural products,
e.g., kinamycine, and streptovaricine.
22,23
Further, the [3 + 2]
cycloadducts of such quinones may act as precursors toward
mitomycin antibiotics.
24
It has also been reported
25
that the
thienyl group is a pharmacologically active moiety and
enhances antimicrobial and antibacterial activity of quinones.
Keeping these features inmind the synthetically feasible model
quinone 1 (Scheme 1) was selected for the present study.
To beginwith we have examined the relative stability of the
three products that may be formed by [3 + 2]/[2 + 2] photo-
cycloaddition of quinone 1 in their ground state (Scheme 1).
The results have been summarized in Table 1.
A carefullook at Table 1 reveals that [3 + 2] photocyclo-
adduct has highest stabilization energy as compared to the other
two or in other words photocycloadduct 2 formed by [3 + 2]
© 2009 The Chemical Society of Japan
Published on the web December 10, 2009; doi:10.1246/bcsj.82.1477
Bull. Chem. Soc. Jpn. Vol. 82, No. 12, 1477–1484 (2009) 1477