Mechanistic Study of Microbial Control
of Hydrogen Sulfide Production in
Oil Reservoirs
M. Nemati,
1
G. E. Jenneman,
2
G. Voordouw
1
1
Department of Biological Sciences, University of Calgary, Calgary,
Alberta, Canada, T2N 1N4; telephone: 1 (403) 2203138;
fax: 1 (403) 2899311; e-mail: nemati@ucalgary.ca
2
Phillips Petroleum Company, 224 GB, Bartlesville, Oklahoma 74004, USA
Received 26 October 2000; accepted 2 March 2001
Abstract: Microbial control of biogenic production of hy-
drogen sulfide in oil fields was studied in a model system
consisting of pure cultures of the nitrate-reducing, sul-
fide-oxidizing bacterium (NR-SOB) Thiomicrospira sp.
strain CVO and the sulfate-reducing bacterium (SRB)
Desulfovibrio sp. strain Lac6, as well as in microbial cul-
tures enriched from produced water of a Canadian oil
reservoir. The presence of nitrate at concentrations up to
20 mM had little effect on the rate of sulfate reduction by
a pure culture of Lac6. Addition of CVO imposed a strong
inhibition effect on production of sulfide. In the absence
of added nitrate SRB we were able to overcome this ef-
fect after an extended lag phase. Simultaneous addition
of CVO and nitrate stopped the production of H
2
S imme-
diately. The concentration of sulfide decreased to a neg-
ligible level due to nitrate-dependent sulfide oxidation
activity of CVO. This was not prevented by raising the
concentration of Na-lactate, the electron donor for sul-
fate reduction. Similar results were obtained with enrich-
ment cultures. Enrichments of produced water with sul-
fide and nitrate were dominated by CVO, whereas enrich-
ments with sulfate and Na-lactate were dominated by
SRB. Addition of an NR-SOB enrichment to an SRB en-
richment inhibited the production of sulfide. Subsequent
addition of sufficient nitrate caused the sulfide concen-
tration to drop to zero. A similar response was seen in
the presence of nitrate alone, although after a pro-
nounced lag time, it was needed for emergence of a siz-
able CVO population. The results of the present study
show that two mechanisms are involved in microbial
control of biogenic sulfide production. First, addition of
NR-SOB imposes an inhibition effect, possibly by in-
creasing the environmental redox potential to levels
which are inhibitory for SRB. Second, in the presence of
sufficient nitrate, NR-SOB oxidize sulfide, leading to its
complete removal from the environment. Successful mi-
crobial control of H
2
S in an oil reservoir is crucially de-
pendent on the simultaneous presence of NR-SOB (ei-
ther indigenous population or injected) and nitrate in the
environment. © 2001 John Wiley & Sons, Inc. Biotechnol Bio-
eng 74: 424–434, 2001.
Keywords: oil reservoir; hydrogen sulfide; souring; ni-
trate; Thiomicrospira sp. strain CVO; reverse sample ge-
nome probing
INTRODUCTION
Souring, the formation of H
2
S, often results when an oil
reservoir is subjected to water flooding for secondary oil
recovery. Souring increases the cost of oil production and is
believed to be mediated by the activity of sulfate-reducing
bacteria (SRB) in the reservoir. SRB are strict anaerobes,
which use hydrogen or simple organic acids or alcohols as
electron donors for sulfate reduction. These are formed as
end-products of fermentative metabolism or through chemi-
cal transformation of buried organic matter at high tempera-
ture and pressure (Shock, 1988). Recent studies have shown
that hydrocarbons in petroleum may also serve as electron
donors in bioreduction of sulfate. Toxicity of H
2
S, acceler-
ated corrosion rates, and decreased efficiency of secondary
oil recovery due to plugging of the reservoir by SRB bio-
mass and precipitated metal sulfides are some of the prob-
lems associated with souring. This dictates control of H
2
S
production, of its release into the environment, and of its
contact with iron and steel parts in tanks, pipelines, valves,
and pumps. Different approaches can be used to control
sulfide contamination. Sulfide production can be reduced by
inhibiting SRB activity by treatment of injection water with
biocides such as glutaraldehyde, cocodiamines, or molyb-
dates. The use of biocide is most successful in controlling
SRB in surface facilities but is of limited effectiveness in
the reservoir, because chemical components in the reservoir
may scavenge biocide through reaction (Reinsel et al.,
1996). Elimination of sulfate from the injection water is
another option to control SRB activity (Bakke et al., 1992).
It is also possible to remove H
2
S from sour water by treat-
ment with physicochemical methods (Montgomery et al.,
1990). Finally, sulfide production can be controlled micro-
bially. For this option it is important to note that oil fields at
moderate subsurface depth and a moderate resident tem-
perature harbor a complex microbial community. Stimula-
tion and control of the metabolism of this community can
prevent or revert souring (Telang et al., 1997). Addition of
nitrate and/or nitrite and introduction of nitrate-reducing,
sulfide-oxidizing bacteria (NR-SOB) such as Thiobacillus
denitrificans in injection water have been shown to control
sulfide accumulation (Jenneman et al., 1986, 1997; McIn-
Correspondence to: M. Nemati
Contract grant sponsors: the Natural Sciences and Engineering Research
Council of Canada and the Phillips Petroleum Company.
© 2001 John Wiley & Sons, Inc.