PRACA ORYGINALNA · SZTUCZNE SIECI NEURONOWE
665 Tom 79 · nr 11 · 2023
Application of Artificial Neural Networks for
Predicting Imidazole Derivatives’ Antimicrobial
Activity against Enterococcus faecalis
Anna Badura
1
, Łukasz Pałkowski
2
, Alicja Nowaczyk
3
, Marta Poćwiardowska-Głąb
4
,
Adam Buciński
1
1
Katedra Biofarmacji, Wydział Farmaceutyczny, Uniwersytet Mikołaja Kopernika w Toruniu,
Collegium Medicum im. Ludwika Rydygiera w Bydgoszczy, Polska
2
Katedra Technologii Postaci Leku, Wydział Farmaceutyczny Uniwersytet Mikołaja Kopernika w Toruniu,
Collegium Medicum im. Ludwika Rydygiera w Bydgoszczy, Polska
3
Katedra Chemii Organicznej, Wydział Farmaceutyczny, Uniwersytet Mikołaja Kopernika w Toruniu,
Collegium Medicum im. Ludwika Rydygiera w Bydgoszczy, Polska
4
Zakład Diagnostyki Laboratoryjnej, Wojewódzki Szpital Dziecięcy im. J. Brudzińskiego w Bydgoszczy, Polska
Farmacja Polska, ISSN 0014-8261 (print); ISSN 2544-8552 (on-line)
Application of Artificial Neural Networks for Predicting Imidazole Derivatives’
Antimicrobial Activity against Enterococcus faecalis
Artificial neural networks (ANNs) have emerged as a valuable tool in
facilitating the design of synthesis and guiding subsequent biological
experiments in the systematic exploration for novel antimicrobial
agents. In this paper, two multilayer perceptron-type neural networks
(MLP) are designed to predict the biological activity of compounds
based on their physicochemical properties and structure. This approach
was tested against Enterococcus faecalis using a series of 140 imidazole
derivatives. The use of quaternary ammonium salts in this research
originated from their acknowledged ability to act as antiseptics
and disinfectants. Additionally, they were considered promising in
addressing various microorganisms, including Gram-positive bacteria.
The designed regression model accurately predicted the minimum
inhibitory concentration for E. faecalis growth. The coefficient of
correlation between the actual values and the network predictions
for the training set was R = 0.91, for the test set was R = 0.91, and for
the validation set was R = 0.97.Additionally, the classification model
successfully categorized the tested compounds as predictively active
or inactive against the targeted microorganism (classification accuracy:
92.86%). Sensitivity analyses highlighted specific molecular descriptors
Corresponding author
Anna Badura, Katedra Biofarmacji,
Uniwersytet Mikołaja Kopernika w Toruniu,
Collegium Medicum im. Ludwika Rydygiera
w Bydgoszczy, Wydział Farmaceutyczny,
ul. Jurasza 2, 85-089 Bydgoszcz, Polska;
e-mail: anna.badura@cm.umk.pl
Sources of financing
No sources of financing were indicated.
Conflict of interest
No conflicts of interest.
Received: 2023.11.30
Accepted: 2024.01.26
Published on-line: 2024.02.07
DOI
10.32383/farmpol/183146
ORCID
Anna Badura – 0000-0002-6560-8231
Łukasz Pałkowski – 0000-0002-8219-6339
Alicja Nowaczyk – 0000-0003-4945-2369
Marta Poćwiardowska-Głąb – 0009-0008-9920-5116
Adam Buciński – 0000-0002-0558-9139
Copyright
© Polish Pharmaceutical Society
This is an open-access article
under the CC BY NC license
https://creativecommons.org/licenses/by-nc/4.0/