© Nature Publishing Group 1974
Nature Vol. 250 August 30 1974
of Physical Review Letters (32, I 336;
I 974), following their demonstration
of the phenomenon in Nature Ph ysical
Science (235, 63; 1972).
In their experiment they studied the
light absorbed rather than emitted by
atoms. The intense light from a tune-
able wavelength laser is shone on the
atoms and is absorbed by a set of
atoms whose component of velocity in
the direction of the light enables the
Doppler-shifted wavelength to be
matched to their absorption. A weaker
probe beam from the same laser, and
therefore having the same wavelength,
made to travel in the opposite dir-
ection so it will be ignored by this set
of atoms but absorbed by another set
whose members have an equal and op-
posite velocity component. There is a
special case when the wavelength is
tuned to be such that the atoms which
absorb the light are moving at right
angles to the light paths and hence
have a very small Doppler shift. Both
sets •then comprise the same atoms
and these being partially saturated by
the intense beam, absorb less of the
probe beam. It is this decrease in
absorption which is detected as a nar-
row signal without any appreciable
Doppler width as the laser wavelength
is tuned through the spectral line.
There is a double advantage in all
this. First , the line-broadening Doppler
effect, which previously blurred to-
gether the closely spaced fine structure
components of the spectral line, is
eliminated. Second, as this technique
entails absorption of nearly mono-
chromatic laser light the interfero-
meter used to measure the wavelength
can have a very small spectral range
and a high resolving power; previously
all the fine structure components were
excited simultaneously in a lamp and
the spectral range of the interferometer
had to be large enough to encompass
them all, with a consequent loss of
resolution.
Hanscih et al. measured <the absolute
wavelengths of some fine structure
components in the Balmer-a lines of
hydrogen and deuterium to determine
a value for the Rydberg constant,
which characterises the wavelength
of the spectral lines, and a value for
the isotope shift between hydrogen and
deuterium , which essentiaHy measures
the ratio of the mass of the electron
to that of the proton. The accuracy
achieved was an order of magnitude
greater than that obtained by the
emission teahnique .
Physicists in the past have used new
techniques to measure accurately the
spectrum of the hydrogen atom and in
each successive instance the results
have not agreed with the current
theoretical description. Each conse-
quent improvement of the theory has
revolutionised physics-witness Bohr's
concept of stationary states which led
to quantum theory . And again, cooling
hydrogen lamp in liquefied gases
na rrowed the spectral lines and revealed
the fine structure which was ultimately
explained by Dirac's relativistic formu-
lation of the quantum theory . Here the
requirement of negative energy states
suggested the existence of the positron
and brought about the science of
elementary particle physics. Further
minute discrepancies (Lamb shifts),
confirmed by another new technique of
radio-frequency spectroscopy, resulted
in the quantum theory of radiation
fields and particles, quantum electro-
dynamics (see Series, The Spectrum of
Atomic Hydrogen; OXlford University
Press 1957). Now measurements of in-
creasing refinement can be anticipated
using this latest technique of saturated
absorption, particularly as what I have
described is only one of a number of
allied methods in which the natural
resonances of atoms which give rise to
their spectral lines can be explored by
tuneable wavelength lasers. (One of
these methods which is especially pro-
mising is two-photon absorption which
has recently been demon strated experi-
mentally, see, for example, Physics
Today, 27, 17; 1974.) Modern physics
owes much to the exploration of the
hydrogen atom at successively higher
levels of precision and there is no
reason to suppose that this process
cannot continue.
Missing link in
folding of trypsin
inhibitor
from Barry Robson
A PARALLEL could be drawn between the
the folding of a globular protein and
biological evolution in that both
represent a transition from a state of
disorder to one of order and function.
Moreover, both processes have their
missing links without which it is impos-
sible to · verify hypotheses concerning
mechanism. The difficulty of finding the
mising links in the foldh1g of a glob-
ular protein is because the process is,
for most proteins , approximately two
state, involving un stable and short-
lived intermediates which cannot
normally be isolated. Three articles by
Creighton (1. molec. Bioi., 87, 563, 579,
603-624; 1974) describe a procedure for
trapping and characterising such inter-
mediates.
As an experimental system, Creighton
chooses bovine pancreatic trypsin in-
hibitor, a small protein of only 58
amino acid residues which inhibits the
catalytic function of certain other
proteins, including trypsin and chymo-
trypsin. The native structure of the
inhibitor as obtained from living tis-
707
sue has been well characteri sed by
X-r ay crystallographic analysis (Huber
et a/ ., Naturwissenschaften, 57, 389-
392; 1970). As in the case of other
globular proteins, the native structure
is a compact, relatively rigid confor-
mation maintained by non-covalent
interactions (that is by van der Waal's,
electrostatic, hydrogen bond and hydro-
phobic interactions), as well as by cov-
alent disulphide bridges between cys
residues. Trysin inhibitor has three
such disulphide bridges.
Since this compact, biologically
active structure is to be the end point
of th e folding process, Creighton first
unfolds the inhibitor in a concentrated
solution of guanidinium chloride,
which breaks the non-covalent inter-
actions , and dithiothreitol, which breaks
the disulphide bridges. In such condi-
tions it is known that typical protein
molecules assume highly flexible, open
conformations which are, strictly
speaking, not single states at all but a
whole collection of conformational
states of roughly equivaleillt energies
separated by low conformational energy
barriers . The importance of starting
with this collection of states is that all
the information for directing the folding
process towards the native conforma-
tion must initially reside only in the
sequence of amii1o acid residues char-
acteristic of trypsin inhibitor and ulti-
mately coded for in the chemical
structure of the gene. It is therefore
regrettable vhat the conformational dis-
order of the inhibitor was not actually
proven before refolding, but only
assumed by analogy to the behaviour of
ofher proteins in these conditions. Al-
though Creighton's indirect evidence
for initial conformational randomness
does not , however, exclude the poss-
ibility of a fairly high degree of residual
conformational structure, nobody
would deny that the absence of such
structure is a reasonable bet which one
hopes will be verified by future hydro-
dynamic tests.
Creighton initiates refolding of this
assumed random structure by removing
the guanidinium chloride by dilution
and adding a disulphide reagent such as
oxidised dithiothreitol. The refolding
reaction is then quenched at different
times by the addition of iodoacetate or
iodoacetamide which stop the further
making and breaking of disulphide
bridges. The species so trapped at
various stages of refolding are sub-
sequently analysed by acrylamide gel
electrophoresis.
When any remammg unbridged
residues of the trapped intermediates
are carboxymethylated, the relative
mobilities of the intermediates in the
acrylamide gel reveal that some con-
tain one and some two disulphide
bridges. Consideration of the time
course of the appearance and disap-