TYPE Original Research
PUBLISHED 16 January 2025
DOI 10.3389/fvets.2024.1507496
OPEN ACCESS
EDITED BY
Hongbin Yan,
Chinese Academy of Agricultural
Sciences, China
REVIEWED BY
Arlex Rodríguez-Durán,
Federal University of Rio Grande do Sul, Brazil
Kaiqing Zhang,
Biocytogen, United States
*CORRESPONDENCE
Chien-Chin Chen
hlmarkc@gmail.com
Abid Ali
uop_ali@yahoo.com
†
These authors have contributed equally to
this work
RECEIVED 08 October 2024
ACCEPTED 02 December 2024
PUBLISHED 16 January 2025
CITATION
Rahman S, Liu H, Shah M, Almutairi MM,
Liaqat I, Tanaka T, Chen C-C, Alouffi A and
Ali A (2025) Prediction of potential drug
targets and key inhibitors (ZINC67974679,
ZINC67982856, and ZINC05668040) against
Rickettsia felis using integrated computational
approaches. Front. Vet. Sci. 11:1507496.
doi: 10.3389/fvets.2024.1507496
COPYRIGHT
© 2025 Rahman, Liu, Shah, Almutairi, Liaqat,
Tanaka, Chen, Alouffi and Ali. This is an
open-access article distributed under the
terms of the Creative Commons Attribution
License (CC BY). The use, distribution or
reproduction in other forums is permitted,
provided the original author(s) and the
copyright owner(s) are credited and that the
original publication in this journal is cited, in
accordance with accepted academic practice.
No use, distribution or reproduction is
permitted which does not comply with these
terms.
Prediction of potential drug
targets and key inhibitors
(ZINC67974679, ZINC67982856,
and ZINC05668040) against
Rickettsia felis using integrated
computational approaches
Sudais Rahman
1†
, Hsien Liu
2†
, Mohibuallah Shah
3
,
Mashal M. Almutairi
4
, Iram Liaqat
5
, Tetsuya Tanaka
6
,
Chien-Chin Chen
7,8,9,10
*, Abdulaziz Alouffi
11
and Abid Ali
1
*
1
Department of Zoology, Abdul Wali Khan University, Mardan, Khyber Pakhtunkhwa, Pakistan,
2
Division
of General Surgery, Department of Surgery, Ditmanson Medical Foundation Chia-Yi Christian Hospital,
Chiayi, Taiwan,
3
Department of Biochemistry, Bahauddin Zakariya University, Multan, Pakistan,
4
Department of Pharmacology and Toxicology, College of Pharmacy, King Saud University, Riyadh,
Saudi Arabia,
5
Microbiology Lab, Department of Zoology, Government College University Lahore,
Lahore, Pakistan,
6
Laboratory of Animal Microbiology, Faculty of Agriculture, Graduate School of
Agricultural Science, Tohoku University, Sendai, Japan,
7
Department of Pathology, Ditmanson Medical
Foundation Chia-Yi Christian Hospital, Chiayi, Taiwan,
8
Department of Cosmetic Science, Chia Nan
University of Pharmacy and Science, Tainan, Taiwan,
9
Doctoral Program in Translational Medicine,
National Chung Hsing University, Taichung, Taiwan,
10
Department of Biotechnology and Bioindustry
Sciences, College of Bioscience and Biotechnology, National Cheng Kung University, Tainan, Taiwan,
11
King Abdulaziz City for Science and Technology, Riyadh, Saudi Arabia
Rickettsia felis, responsible for flea-borne spotted fever, is a rising zoonotic
pathogen posing an increasing global threat due to its expanding geographical
distribution. The rise in antibiotic-resistant strains of this pathogen underscores
the urgent need for new therapeutic interventions. This study employed
a comprehensive subtractive proteomics analysis of the R. felis proteome,
aiming to identify essential, non-host homologous, and pathogen-specific
proteins, which were subsequently evaluated as potential new drug targets.
These findings offer valuable insights into the development of therapeutic
strategies against rickettsiosis. The analysis revealed 343 proteins that are
non-homologous to the host, including 108 essential proteins, 25 unique
metabolic pathways, and 11 distinct proteins. Out of these, 10 proteins were
druggable in which two associated with virulence, and one related to resistance
(succinate dehydrogenase). Through a rigorous screening process and extensive
literature review, succinate dehydrogenase emerged as a promising drug
target. Protein interaction partners for succinate dehydrogenase were identified
using the STRING database. To further assess the functionality of succinate
dehydrogenase, structure-based studies were conducted. Approximately 18,000
ZINC compounds were screened, leading to the finding of six potential
inhibitors: ZINC67847806, ZINC67982856, ZINC67974679, ZINC67895371,
ZINC05668040, and ZINC05670149. Absorption, distribution, metabolism,
excretion, and toxicity (ADMET) profiling confirmed that most compounds
met the preferred pharmacokinetic properties, except for ZINC67895371 and
ZINC67847806, which exhibited positive ames test results, and ZINC05670149,
ZINC67895371, and ZINC67847806, showed hepatotoxicity. All compounds
were found to be non-sensitizing to the skin. Based on these findings, further
Frontiers in Veterinary Science 01 frontiersin.org