Nigeria Journal of Plant Breeding
Volume 2(1), pages 1 - 12, September 2025
ISSN: 2814-3531
Copyright © 2025 Harriman et al
https://pbanjournal.org/
PLANT BREEDERS ASSOCIATION OF NIGERIA
Full Length Research
CLUSTER ANALYSIS AND GENOTYPE × ENVIRONMENT (G × E) ASSESSMENT
FOR ROOT YIELD IN 35 ORANGE-FLESHED SWEETPOTATO GENOTYPES
1
Harriman, J. C.,
1
Okocha, P. I.,
1
Nwofia, G.E.,
1
Okoronkwo, C.M.,
1
Nwadinobi, C.A.,
2
Onyeabo, C.N.P.,
3
Ogu, C. E.,
4
Orji, J.O.,
5
I. B. Agboeke,
6
Davids, Emmanuel C.F
1
Department of Agronomy, Michael Okpara University of Agriculture, Umudike, Abia State, Nigeria.
2
Department of Plant Science
and Biotechnology, Abia State University, Uturu, Abia State, Nigeria.
3
Department of Agricultural Science, Alvan Ikoku Federal
College of Education, Owerri, Imo State, Nigeria.
4
Department of Crop Science, University of Agriculture and Environmental
Sciences, Umuagwo, Imo State, Nigeria.
5
Department of Soil Science and Meteorology, Michael Okpara University of Agriculture,
Umudike, Abia State, Nigeria.
6
Department of Crop Science and Biotechnology, Faculty of Agriculture, Imo State University Owerri.
Received 18th July, 2025; Accepted 28th August, 2025
ABSTRACT: Orange-fleshed sweetpotato (OFSP) is a biofortified food of Beta carotene that fights vitamin A deficiency
and promotes nutritional security. The success to select and identify the superior genotype is limited by Genotype and
Environment (G×E) interactions. The study was conducted to estimate the magnitude of G×E and to select stable and high
yielding OFSP in three locations, and to identify the most discriminating test environments. Similarly, to characterized
them according to similarities in traits. These genotypes were subjected to heatmap cluster analysis. The 35 OFSP
genotypes were evaluated across 3 environments using a RCBD with three replications. The data were subjected to
ANOVA using R package. The AMMI model analysis indicated that genotype (G) and environment(E) had significant
effects on root yield and the contribution to the total sum of squares difference was 64.89% and 6.35%, respectively. The
remaining 3.87 % of the variation resulted from GxE effects. G24, G35 and G34 exhibited high mean root yield across
environments with high degree of stability. These hybrids have the potential for production across the test locations as
well as others within the same agro-ecological zones. However, G3, G12 and G30 were not only low yielding but also
among the least stable genotypes. The best genotype with respect to location include G15 and G14 which were best for
Umudike (E1), while G34 and G4 were the best genotype for Igbariam (E1) area. G24 performed well in FUTO (E3).
Among the locations, E1 was the most productive site in distinguishing genotypes and the most representative
environment. The Cluster heatmap analysis grouped the 35 genotypes into 4 clusters with distinct features. Cluster I was
recommended for high root girth, high root yield performance and high beta carotene content, while clusters II and IV
were recommended for high dry matter and high starch. Cluster III was characterized with short vine length.
Keywords: G x E interaction, additive main effect and multiplicative interaction (AMMI), stability, heatmap cluster
analysis, OFSP.
INTRODUCTION
The orange-fleshed sweetpotato (Ipomoea batatas)
(OFSP) is grown in more than 100 countries (Woolfe,
1992). Among the tuber crops grown in the world,
sweetpotato ranks fourth after cassava, yam and
cocoyam (Ray and Ravi, 2005). It is grown as a
starchy food crop throughout the tropical, sub-tropical
and frost-free temperate climate zones in the world
(ICAR, 2007, Nedunchezhiyan et al., 2012). The crop
is very important in promoting nutritional security
particularly in agriculturally backward areas
(Srinivas, 2009) with poor soils. It can be
* Corresponding Author E-mail; ch.john@mouau.edu.ng,
Tel: +234)8060690357
This article remains permanently open access under the terms
of the Creative Commons Attribution License 4.0, which permits
unrestricted use, distribution, and reproduction in any medium,
provided the original work is properly cited.