Using Time Series Segmentation for Deriving Vegetation Phenology Indices from
MODIS NDVI Data
Varun Chandola
∗
, Dafeng Hui
†
, Lianhong Gu
‡
, Budhendra Bhaduri
∗
and Ranga Raju Vatsavai
∗
∗
Geographic Information Science & Technology
Oak Ridge National Laboratory
Oak Ridge, TN 37831-6017
Email: chandolav,vatsavairr,bhaduribl@ornl.gov
†
Department of Biological Sciences
Tennessee State University
Nashville, TN 37209
Email: dhui@tnstate.edu
‡
Environmental Sciences Division
Oak Ridge National Laboratory
Oak Ridge, TN 37831-6017
Email: lianhong-gu@ornl.gov
Abstract—Characterizing vegetation phenology is a highly
significant problem, due to its importance in regulating ecosys-
tem carbon cycling, interacting with climate changes, and
decision-making of croplands managements. While ground
based sensors, such as the AmeriFlux sensors, can provide
measurements at high temporal resolution (every hour) and can
be used to accurately calculate vegetation phenology indices,
they are limited to only a few sites. Remote sensing data, such as
the Normalized Difference Vegetation Index (NDVI), collected
using the MODerate Resolution Imaging Spectroradiometer
(MODIS), can provide global coverage, though at a much
coarser temporal resolution (16 days). In this study we use
data mining based time series segmentation methods to derive
phenology indices from NDVI data, and compare it with the
phenology indices derived from the AmeriFlux data using a
widely used model fitting approach. Results show a significant
correlation (as high as 0.60) between the indices derived from
these two different data sources. This study demonstrates
that data driven methods can be effectively employed to
provide realistic estimates of vegetation phenology indices using
periodic time series data and has the potential to be used at
large spatial scales and for long-term remote sensing data.
Keywords-vegetation phenology; time series; segmentation
I. I NTRODUCTION
Vegetation (or plant) phenology is the study of the timing
of seasonal cycles of vegetation activity, such as onset of
greening in the spring, timing of the maximum of the
growing season, leaf senescence, vegetation dormancy, and
the total length of growing season [1], [2]. Many such events
are recurring plant life cycle states that are initiated by
environmental factors and are sensitive to climatic variation
and change [3], [4]. Thus, phenological studies can be
used to evaluate the effects of climate change. Vegetation
phenological stages of crops are also important indicators in
agricultural production, management, planning and decision-
making [2], [5]. In addition, vegetation phenology is impor-
tant for predicting ecosystem carbon, nitrogen, and water
fluxes [6], [7], as the seasonal and interannual variation
of phenology have been linked to net primary production
estimation, crop yields, and water supply [8], [9]. Variability
in growing season length is likely to have a direct impact
on the ecosystem carbon and water balances [9], [10]. Char-
acterization of vegetation phenology at site, regional, and
national scales has been recognized as important for many
scientific and practical applications [2]. Accurate assessment
of phenological events, therefore, becomes increasingly vital
for investigating vegetation-climate interactions, quantifying
ecosystem fluxes and croplands managements [11].
0 50 100 150 200 250 300 350 400
2000
3000
4000
5000
6000
7000
8000
9000
10000
Days
NDVI
Maximum NDVI
Rate of Green
up
Start of Season (Green up)
Duration of Growth
End of Season
Rate of
Senescence
Figure 1. Phenological Characteristics from NDVI Time Series for a
Cropland Site (Bondville, USA, 2006)
Vegetation phenology can be assessed using different
approaches at scales from small plots to large spatial
2010 IEEE International Conference on Data Mining Workshops
978-0-7695-4257-7/10 $26.00 © 2010 IEEE
DOI 10.1109/ICDMW.2010.143
202
2010 IEEE International Conference on Data Mining Workshops
978-0-7695-4257-7/10 $26.00 © 2010 IEEE
DOI 10.1109/ICDMW.2010.143
202