The Ecological Role of the Vaquita, Phocoena sinus, in the Ecosystem of the Northern Gulf of California Marjorie Riofrı ´o-Lazo, 1,2 * Francisco Arreguı´n-Sa ´nchez, 2 Manuel Zetina-Rejo ´n, 2 and Fabia ´n Escobar-Toledo 2 1 Galapagos Science Center, Universidad San Francisco de Quito (USFQ) and The University of North Carolina at Chapel Hill (UNC), Ave. Alsacio Northia, Pto. Baquerizo Moreno, San Cristo ´ bal Island, Gala ´ pagos, Ecuador; 2 Centro Interdisciplinario de Ciencias Marinas, Instituto Polite ´ cnico Nacional, P.O. Box 592, 23060 La Paz, BCS, Mexico ABSTRACT From an ecosystem management perspective, anal- ysis of the functional roles of species is a challenge. It is valuable to determine which species are irre- placeable within a given community based on their contribution to the system’s organization. This study relates the emergent functional and structural indi- ces of biological groups estimated from a trophic model of the Northern Gulf of California to identify the roles of these groups in the ecosystem context, with a particular focus on the role of the vaquita, an endemic porpoise in critically endangered status. The simulation of removing each group allowed the analysis of the removal’s functional effect on the ecosystem’s global attributes and organization (based on Ulanowicz’s ascendency concept). Groups from lower trophic levels (TL) were more related to com- plexity indicators, suggesting their contribution to the organization and structure of energy flows in the food web. Groups from intermediate TL had higher values of structural indexes, indicating their function in the control of flows throughout the network. The vaquita along with other marine mammals, aquatic birds, and some species of fish with a high TL con- tribute in a similar way to the order (for example, ascendency/capacity-of-development ratio) of the system, showing a relatively high value of ascen- dency (contribution of the group to the organization inherent to the ecosystem) and the change in eco- system ascendency when they were removed. The vaquita, like marine and coastal birds, plays a small role in the ecosystem. But like them, it does con- tribute substantially to ecosystem organization. This study thus provides information potentially useful for management in understanding the species’ role and in reducing uncertainty in decision-making. Key words: vaquita; Northern Gulf of California; role of groups; emergent network indices; trophic ecosystem model; ecosystem order; ecosystem functioning; energy flows. INTRODUCTION The Gulf of California hosts diverse ecosystems and important fisheries that support industry and pro- vide a livelihood to coastal settlements (Lluch-Cota and others 2007). Physical and biological charac- teristics vary significantly along the gulf (Lercari and others 2007). The Northern Gulf of California (NGC), an area of 36,000 km 2 , is partially isolated Received 11 January 2012; accepted 5 October 2012; published online 6 December 2012 Authors Contributions: MR designed methods, analyzed data and wrote the paper. FA conceived and designed study, analyzed data and reviewed drafts. MZ designed study, analyzed data and reviewed drafts. FE analyzed data. All the authors participated in the interpretation and discussion of the results. *Corresponding author; e-mail: marjorieriofrio@gmail.com Ecosystems (2013) 16: 416–433 DOI: 10.1007/s10021-012-9618-z Ó 2012 Springer Science+Business Media New York 416