Small Ruminant Research 113 (2013) 62–65
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Small Ruminant Research
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Technical note
Parentage verification of Valle del Belice dairy sheep using
multiplex microsatellite panel
A.J.M. Rosa
a
, M.T. Sardina
b,∗
, S. Mastrangelo
b
, M. Tolone
b
, B. Portolano
b
a
EMBRAPA Cerrados Brazilian Agricultural Research Corporation, Ministry of Agriculture, Livestock and Food Supply, Br 020,
km 18 – Cx.p. 08223, 73310-970 Planaltina, DF, Brazil
b
Dipartimento Scienze Agrarie e Forestali, Università degli Studi di Palermo, Viale delle Scienze, Parco d’Orleans, 90128 Palermo, Italy
a r t i c l e i n f o
Article history:
Received 13 July 2012
Received in revised form 26 March 2013
Accepted 28 March 2013
Available online 1 May 2013
Keywords:
Valle del Belice dairy sheep
Microsatellites
Multiplex
Parentage test
a b s t r a c t
The aim of this work was to develop and evaluate a PCR based microsatellite markers
multiplex system for parentage verification of Sicilian Valle del Belice dairy sheep. A total
of 85 samples of blood and hair were collected and genotyped for 24 microsatellite markers
in multiplex electrophoresis runs. A total of 269 alleles were detected across the 24 loci
investigated. The PIC considering all loci was equal to 0.736, showing that this microsatellite
panel was very polymorphic and highly informative. A parentage test was performed on 64
families generated with multiple sires. Results indicated 20.3% and 29.7% misidentification
rates for females and males, respectively. In 8 cases, out of 13 maternal exclusions, the real
mother was identified among other females within the flock. The observed misidentification
rates indicated the necessity of keeping more efficient collection of genealogical records,
in order to properly control inbreeding or implement a breeding program. The parentage
test presented here could be a helpful tool on verifying or even reconstructing the current
pedigree data of Valle del Belice dairy sheep breed.
© 2013 Elsevier B.V. All rights reserved.
1. Introduction
Animal breeding programs use mixed models to pre-
dict breeding values for economically important traits and
select seedstock animals. The methodology of Henderson
(1988) uses a relationship matrix of the animals to solve
the mixed model generating additive genetic values
with BLUP properties. Therefore, paternity errors have
a detrimental effect on population genetic parameters
estimation and breeding value prediction (Van Vleck,
1970; Lee and Pollak, 1997). Paternity errors can reach
up to 20% of animals registered in various countries
(Ron et al., 1996), drastically reducing the genetic gain,
beside impacting inbreeding control. The Valle del Belice
∗
Corresponding author. Tel.: +39 091 23896069;
fax: +39 091 23860814.
E-mail address: mariateresa.sardina@unipa.it (M.T. Sardina).
is the most appreciated sheep breed reared in Sicily for
milk production, and nowadays about 215,000 animals are
enrolled in the herd book belonging to approximately 1250
flocks (ASSONAPA, 2012). In the Sicilian farming system,
natural mating is the most common practice. Moreover,
the exchange of rams among flocks is quite unusual and the
reproductive management is characterized by unrecorded
mating with multiple sires. Therefore, there is a need to
generate reliable pedigree for inbreeding control beside
engendering a breeding program. For pedigree reconstruc-
tion, given the demand of heterozygosity, microsatellite is
the most commonly used markers characterized by higher
number of alleles than other neutral markers (e.g. Single
Nucleotide Polymorphisms, SNPs). Microsatellite based
parentage tests for relationship verification or assignment
in case of unrecorded mating or multiple sires have been
developed for many species, including dogs (De Nise et al.,
2004), cats (Lipinski et al., 2007), horses (Tozaki et al.,
2001), cattle (Van Eenennaam et al., 2007), goats and sheep
0921-4488/$ – see front matter © 2013 Elsevier B.V. All rights reserved.
http://dx.doi.org/10.1016/j.smallrumres.2013.03.021