Combination of Tucker3 model with cluster analysis for the assessment of the
microbiological activity on benzimidazolium salts
Gyula Oros
a
, Tibor Cserháti
b,
⁎
a
Plant Protection Institute, Hungarian Academy of Sciences, 1022 Herman O. 15, Budapest, Hungary
b
Research Institute of Materials and Environmental Chemistry, Chemical Research Center, Hungarian Academy of Sciences, P.O. Box 17,1525 Budapest, Hungary
abstract article info
Article history:
Received 15 July 2008
Received in revised form 15 September 2008
Accepted 7 October 2008
Available online 1 November 2008
Keywords:
Benzimidazolium salts
Microbiological effect
Tucker3 model
Cluster analysis
The antimicrobial effect of 7 benzimidazolium salts (base, chloride, sulfate, phosphate and nitrate forms) was
determined on 15 microorganisms. The similarities and dissimilarities among the data consisting of the
benzimidazolium salts and microorganisms were elucidated by using the Tucker model combined with
cluster analysis. The calculations demonstrated that the combined method can be successfully employed for
the separation of the impact of the molecular structure and cation type on the antimicrobial activity of the
base and benzimidazolium salts.
© 2008 Elsevier B.V. All rights reserved.
1. Introduction
Principal component analysis (PCA), a versatile and easy-to-use
multivariate mathematical–statistical method, has been developed to
contribute to the extraction of maximal information from large data
matrices containing numerous columns and rows [1]. As PCA is only
suitable for the elucidation of the similarities and dissimilarities among
the columns and rows of two-dimensional data matrices it cannot be
employed for the evaluation of arrays of higher dimensions. A consider-
able number of multiway mathematical statistical methods was devel-
oped and successfully applied for the analysis of multi-dimensional
arrays. The application of parallel factor analysis [2–4], direct fitting
algorithm [5], and canonical decomposition analysis [6] was previously
reported. The Tucker3 model or three-way PCA [7,8] and its improved
version [9] have also been developed for the analysis of the similarities
and dissimilarities among N-dimensional data arrays. The basic mathe-
matical construction of the method is discussed in detail in refs [7–9].
The Tucker3 model computes three ortogonal matrices with lower
dimensions than the original data arrays such a manner that the
variance explained by the reduced matrices being as high as possible.
The usefulness of these calculation methods have been proven in many
fields of up-to-date data evaluation such as in the analysis of retention
data in normal phase high-performance liquid chromatography [10],
environmental analysis [11], person perception analysis in phsychology
[12], medium-rank second order calibration [13], and enzyme produc-
tion [14,15]. Similarly to 2-dimensional PCA traditional significant tests
cannot be employed for the determination of the reliability of the
results. As the resulting computed matrices of Tucker3 model are
generally multidimensional they cannot be reliably evaluated by visual
methods except in the cases when the first two elements of the data
array explain the overwhelming majority of variance. Cluster analysis
[16] has been developed for the reduction of the dimensionality of
multidimensional arrays. Cluster analysis projects the points scattered in
the multidimensional space on a plane such a manner that the distances
among the points in the multidimensional space on the plane are as
similar as possible. The objectives of the study were the measurement of
the microbiological effect of benzimidazolium salts containing various
cations, the application of the combination of Tucker3 model and cluster
analysis for the evaluation of the dependence of the microbiological
effect on the type of test organism, chemical structure of the free
benzimidazolium base and the type of cation.
To the best of our knowledge a Tucker3 model combined with
cluster analysis has never been used in pesticide science and
management.
2. Experimental
The IUPAC and common names of benzimidazole derivatives are
compiled in Table 1 . The free base and the salts formed with Cl
-
, SO
4
2-
,
PO
4
3-
and NO
3
-
were included in the experiments (altogether 5 × 7
elements). The data in Table 1 do not show the core elements with the
corresponding explained variance. Species tested for the microbiolo-
gical activity are listed in Table 2. (altogether 15 species)
The fungi tested were taken from the collection of the Plant
Protection Institute of the Hungarian Academy of Sciences (Budapest,
Hungary). The test species represent various taxonomic groups as well as
modes of habitation (saprotrophes, species parasitizing predominantly
Chemometrics and Intelligent Laboratory Systems 96 (2009) 1–5
⁎ Corresponding author. Tel.: +36 1 325 7900; fax: +36 1 325 7554.
E-mail address: tevi@chemres.hu (T. Cserháti).
0169-7439/$ – see front matter © 2008 Elsevier B.V. All rights reserved.
doi:10.1016/j.chemolab.2008.10.003
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