Volume 6 • Issue 4 • 1000303
J Bioremed Biodeg
ISSN: 2155-6199 JBRBD, an open access journal
Research Article Open Access
El Mahdi et al., J Bioremed Biodeg 2015, 6:4
http://dx.doi.org/10.4172/2155-6199.1000303
Research Article Open Access
Bioremediation & Biodegradation
ISSN: 2155-6199
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Keywords: Isolation; Identiication; 16S Rdna; Biodegradation;
Crude oil; SWD
Introduction
he ocean and other water bodies have captured the imagination
of people for thousands of years. Most of the life forms exist mostly in
these water bodies and therefore, speciic laws, and regulations have
been framed to protect this delicate marine environment. It is also
the major source of food chain and is known for diversity of aquatic
species [1,2]. Marine oil pollution occurs when any organic or toxic
chemical substances enter the sea water. hese chemical hazards can
lead to severe pollution of the system either for short duration or
over long period of time. Primarily it afects the biological process
thereby damaging the marine life cycle. Most common causes of
marine pollution are due to oil spill occurring at sea. hese oil spills
deteriorate the marine environment to such an extent that, it destroys
the existing ecosystem accordingly afecting the bio diversity and
human wellbeing [3-5]. he oil spill results in signiicant changes in its
physical and chemical structure [6,7]. he photolysis of oil can result
in the formation of many byproducts such as the aromatic oxygenated
compounds, aliphatic, benzoic and naphthanoic acids, alcohols,
phenols and aliphatic ketones [8,9].
In Libya, 5 oil terminal facilities and many diferent operating
companies are discharging eluents at risk rate. Oil pollution presents
the hazard along parts of the Libyan Marine Coast where Oil Industries
are located. his severely afects ecosystem. With the focus on the
protection of environment and pollution control in Libya, most of
the terminal facilities with the conventional ballast water process are
likely to face a serious threat in coming years and need has been felt
for a safe, environmental friendly process which eliminates the use of
discharging of ballast water into sea. At present, bioremediation use
of microorganisms to remove pollutants is oten the most suitable
method for remediation of especially petroleum hydrocarbons,
because it is cost-efective and, it converts the petroleum hydrocarbons
into the harmless by-products such as carbon dioxide and water
[10,11]. Various microbial populations, including Bacteria, Fungi
and Algae can metabolize the hydrocarbons found in crude oil. In
literature, bacterium was considered to be the most important group of
petroleum degrading organisms because its allow adaptation to various
environments, have a rich taxonomic, metabolic, physiological, and it
has more rapid metabolic rates. Moreover, bacteria can be genetically
manipulated to improve their bioremediation capabilities [12,13].
here are at least 175 genera of bacteria that can metabolize petroleum
hydrocarbons, which include- Pseudomonas, Aeromonas, Bacillus,
Flavobacterium, Corynebacterium, Micrococcus etc. [14]. Based on
crude oil degradation capacity, Pseudomonas aeruginosa is the most
active hydrocarbon utilize in crude oil. Previous observations have
identiied the Pseudomonas genus most eicient among hydrocarbon
degrading microorganisms [15-17].
Further use of surfactants has been found to enhance degradation
of crude oil [18,19]. Among various surfactants, rhamnolipids are
considered to be the most eicient way in degrading hydrocarbons
[20-22]. Most studies reported the efectiveness of using consortium
bacterium compared with the single strain bacteria. Single strain is
still not efective in terms of biodegradability. Both consortium and
single strains reported limited performance when used in high crude
oil concentration. he isolated Kocuria sp. from contaminated water
by crude oil was recently received attention in crude oil biodegradation
[23]. However, the success of their production depends on the increase
of yield, the development of economic biotechnology processes, and
the use of low cost efective renewable agro-industrial substrates for
their production. However, the performance of employing SWD and
CSL as a low-cost material to enhance single strain bacteria in removing
highly contaminated crude oil was not well investigated. he aim of this
*Corresponding author: Prof. Hamidi Abdul Aziz, School of Civil Engineering,
Engineering Campus, Universiti Sains Malaysia, 14300 Nibong Tebal, Penang,
Malaysia, Tel: + 60-45996215; Fax: +60-45941009; E-mail: cehamidi@eng.usm.my
Received June 09, 2015; Accepted July 06, 2015; Published July 08, 2015
Citation: El Mahdi AM, Aziz HA, Abu Am SS, El-Gendy NS, Nassar H (2015)
Performance of Isolated Kocuria sp. SAR1 in Light Crude Oil Biodegradation. J
Bioremed Biodeg 6: 303. doi:10.4172/2155-6199.1000303
Copyright: © 2015 El Mahdi AM, et al. This is an open-a ccess article distributed
under the terms of the Creative Commons Attribution License, which permits
unrestricted use, distribution, and reproduction in any medium, provided the
original author and source are credited.
Performance of Isolated Kocuria sp. SAR1 in Light Crude Oil
Biodegradation
Abdullah M. El Mahdi
1
, Hamidi Abdul Aziz
1,2
*, Salem S Abu Am
1
, Nour Sh. El-Gendy
3
and Hussein Nassar
3
1
School of Civil Engineering, Engineering Campus, Universiti Sains Malaysia, 14300 NibongTebal, Penang, Malaysia
2
Solid Waste Management Cluster, Engineering Campus, Universiti Sains Malaysia, 14300 Penang, Malaysia
3
Egyptian Petroleum Research Institute, Nasr City, Cairo 11727, Egypt
Abstract
In the current study; Kocuria sp. SAR1 was isolated from ‘Tobruk Reinery’ oil water pit, located along the eastern
coast of Libya. The isolated bacterial strain SAR1 was characterized as an aerobic, Gram +ve, spherical-shaped,
oxidase – but catalase +. Phenotypic characters and phylogenetic analysis based on the 16S rRNA gene of the
isolate SAR1 showed that it was related to members of the Kocuria genus. The alignment of the 16S rRNA gene
sequences of SAR1 with sequences obtained by doing a Blast searching revealed 96% similarity to Kocuria palustris
strain TAGA27. Solid waste dates (SWD) and corn steep liquor (CSL) as agro-industrial products were performed to
enhance the performance of Kocuria sp. SAR1 in crude oil biodegradation. During bacterial growth, high emulsifying
activity to the presence of cells was observed, which is concluding the production of bio surfactant by strain SAR1.
The bacterial strain showed removal eficiency of 68% and 70% of crude oil in 28 days when cultivated with 0.2%
(w/v) of CSL and SWD, respectively. Crude oil metabolizing bacterium can secrete surfactants using agro industrial
as substrates, which further enhance the hydrocarbon degradation.