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Letters in Drug Design & Discovery, 2014, 11, 000-000 1
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Correlation Between Structure, Retention and Lipophilicity of Some Anti-
depressants: QSRR and QSAR Studies
Danica S. Perušković, Nikola R. Stevanović
*
, Aleksandar D. Lolić and Rada M. Baošić
*
Faculty of Chemistry, University of Belgrade, Studentski trg 12-16, Belgrade, Serbia
Abstract: The objectives of this study were to gain insights into the structure-retention and structure-lipophilicity rela-
tionships of series of twenty antidepressants and to propose model for estimating their retention and lipophilicity. The li-
pophilicity of antidepressants has been determined by reversed-phase thin-layer chromatography using binary methanol–
water mobile phases. The chemical structures of the antidepressants have been characterized by molecular descriptors
which are calculated from the structure and related to the chromatographic retention parameters as well as chromatograph-
ically determinated lipophilicity parameters by multiple linear regression analysis. The obtained models were used for in-
terpretation of the lipophilicity and retention behavior of the investigated compounds.
Keywords: Antidepressants, lipophilicity, QSAR, QSRR, reversed-phase thin layer chromatography.
INTRODUCTION
Quantitative structure-activity relationship (QSAR) mod-
eling pertains to the construction of predictive models of
biological activities as a function of structural and molecular
information of compound library. Typical molecular descrip-
tors used to describe electronic properties, hydrophobicity,
steric effect and topology, can be determined empirically
through experimentation or theoretically via computational
chemistry. Computationally determined property parameters
have became crucial in identifying potential drug candidates.
This technique is used for the selection of the optimal candi-
date for clinical investigations. Quantitative structure-
retention relationship (QSRR) is useful technique that shows
relationships between chromatographic properties and mole-
cular descriptors characterizing the structure of investigated
compounds. In this case, retention is modeled as function of
structural or molecular descriptors [1-4].
Depression is a medical condition that causes a persistent
feeling of sadness and loss of interest, and can cause physi-
cal symptoms [5, 6]. The etiology of depression is suggested
to be dysfunction of monoamine neurotransmitters in central
nervous system (CNS), such as serotonin, dopamine and
norepinephrine. However, the real cause of this disease is not
yet known. Antidepressants are psychiatric agents used for
the treatment of different types of depression [7, 8]. It is very
important to control the antidepressants distribution to the
place of action. The lipophilicity has a significant impact on
the absorption, distribution, metabolism, and excretion of
compounds (ADME properties). Antidepressants are target-
ing the CNS, so they must have certain lipophilicity to be
able to pass the blood brain barrier by P-glycoprotein [9, 10].
Also, the gastrointestinal resorption and distribution of drugs
through the bloodstream, by means of albumin, is dependent
on lipophilicity [11]. The general rule is, the more lipid
*Address correspondence to these authors at the Faculty of Chemistry,
University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia; Tel:
+381 11 3336 790; Fax: +381 11 2184 330; E-mails: rbaosic@chem.bg.ac.rs
and nikola@chem.bg.ac.rs
soluble, a molecule or drug is, the more readily it will tend to
enter the brain tissue [10].
In preclinical trials the determination of lipophilicity of
potential drug (through either experimental measurement or
prediction) is one of the first selection criteria. The classical
procedure is the determination of lipophilicity in terms of log
P (the partition coefficient), which is descriptor of the diffe-
rential partitioning of a neutral compound between two im-
miscible solvents, usually octan-1-ol and water [12]. Instead
of this method, reversed-phase thin layer chromatography
(RP-TLC) is frequently used for estimation of the lipophilici-
ty [13,14].
The aim of this study was to gain insights into the struc-
ture-retention and structure-lipophilicity relationships of
series of twenty antidepressants and to develop statistical
models capable of predicting the reversed-phase chromato-
graphic behavior and lipophilicity parameter based on their
molecular properties. Set of the investigated compounds
shows significant differences in structures. The reason for
taking this diverse set of antidepressants is to determine the
common structural parameter that has influence on retention
and lipophilicity.
MATERIALS AND METHODS
Chromatography
Chromatographic investigations were carried out by hori-
zontal thin layer chromatography on silica gel RP18 plates,
10 × 10 cm (Merck, Darmstadt, Germany) using a Camag
horizontal HPTLC development chamber in the tank confi-
guration. Standard solutions (5 mg/mL) of the compounds
were prepared in chloroform. The plates were spotted with
1.0 L aliquots of freshly prepared solutions of the corres-
ponding compound. Before development, the spotted plates
were equilibrated for 30 min in a chromatographic chamber
saturated with mobile phase vapor. The used mobile phase
was a mixture of methanol (as organic modifier) and water.
The concentration of organic modifier in the mobile phase
ranged from 50 to 80% (v/v) in 5% increments. The investi-