Genetic variations in detoxification enzymes and HIF-1a in
Japanese patients with COPD
Andika Chandra Putra
1
, Keiji Tanimoto
1
, Marina Arifin
1
, Budhi Antariksa
2
and Keiko Hiyama
1
1 Department of Radiation Medicine, Research Institute for Radiation Biology and Medicine, Hiroshima University, Hiroshima, Japan
2 Department of Pulmonology and Respiratory Medicine, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia
Abstract
Introduction: Genetic factors contribute as major determinants in the pathophysi-
ological mechanisms of chronic obstructive pulmonary disease (COPD). There-
fore, identification of candidate genes and various gene polymorphisms have
improved our understanding of COPD.
Objectives: Clarify the genes, including HIF1A, that contribute to the development
of COPD.
Methods: We compared the genotype frequencies of 12 polymorphisms in seven
detoxification-related genes (GSTM1, GSTT1, GSTP1 exon 5, CYP1A1 exon 7,
CYP1A1 3′-flanking, CYP2E1 intron 6, CYP2E1 5′-flanking, EPHX1 exon 3, EPHX1
exon 4 and HMOX1 promoter) and the hypoxia-related HIF1A (C1772T and
G1790A) genes between 48 Japanese patients with work-related COPD who had a
working history in a poison gas factory during World War II and two control
groups (n = 172 and 110 subjects, respectively).
Results: As expected, wild homozygotes for GSTP1 Ile105Val and EPHX1 slow/very
slow phenotypes were associated with susceptibility (P = 0.031) and severity
(P = 0.036) of COPD, respectively. Moreover, compound heterozygosity of
transcription-activating HIF1A polymorphisms was observed in two patients with
COPD, but not in control individuals (P = 0.091).
Conclusion: This is the first report that examined HIF1A polymorphisms in COPD
and demonstrated a possible role of HIF-1a in COPD, as well as GSTP1 and
EPHX1.
Please cite this paper as: Putra AC, Tanimoto K, Arifin M, Antariksa B and Hiyama
K. Genetic variations in detoxification enzymes and HIF-1a in Japanese patients
with COPD. Clin Respir J 2011; DOI:10.1111/j.1752-699X.2011.00255.x.
Key words
COPD – detoxification – genetic susceptibility
– hypoxia-inducible factor 1 – polymorphism
Correspondence
Keiko Hiyama, MD, PhD, Department of
Radiation Medicine, Research Institute for
Radiation Biology and Medicine, Hiroshima
University, 1-2-3 Kasumi, Minami-ku,
Hiroshima 734-8551 Japan.
Tel: +81 82 257 5841
Fax: +81 82 256 7105
email: khiyama@hiroshima-u.ac.jp
Received: 03 August 2010
Revision requested: 24 November 2010
Accepted: 19 January 2011
DOI:10.1111/j.1752-699X.2011.00255.x
Authorship and contributorship
AC Putra, sequence/data analysis and
preparation of the manuscript; K Tanimoto,
study design and preparation of the
manuscript; M. Arifin, contributed in
experiments; B. Antariksa, experimental
design; K. Hiyama, study design, experiments
and manuscript preparation.
Ethics
This study was approved by Genetic and
Medical Ethics Committee, Hiroshima
University, and has been performed in
accordance with the ethical standards. All
persons gave their informed consent prior to
their inclusion in the study.
Conflicts of interest
The authors have stated explicitly that there
are no conflicts of interest in connection with
this article.
The Clinical Respiratory Journal ORIGINAL ARTICLE
1 The Clinical Respiratory Journal (2011) • ISSN 1752-6981
© 2011 Blackwell Publishing Ltd