Journal of Biomolecular NMR, 23: 155–156, 2002.
KLUWER/ESCOM
© 2002 Kluwer Academic Publishers. Printed in the Netherlands.
155
Letter to the Editor: Assignment of the
1
H,
13
C and
15
N resonances and
secondary structure of the monomeric p13
suc1
protein of Saccharomyces
pombe
Benoît Odaert
a,b,∗
, Isabelle Landrieu
a
, Klaas Dijkstra
b
, Gea Schuurman-Wolters
b
, Peter
Casteels
c
, Jean-Michel Wieruszeski
a
, Ruud Scheek
b
& Guy Lippens
a
a
CNRS UMR 8525, Institut de Biologie de Lille/Pasteur Institute of Lille, 59019 Lille Cedex, France;
b
The Gronin-
gen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 4 Nijenborgh, 9747 Groningen,
The Netherlands;
c
Laboratorium voor Genetica, Department of Plant Genetics, Flanders Interuniversity Institute
for Biotechnology (VIB), Universiteit Gent, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium
Received 30 January 2002; Accepted 20 March 2002
Key words: cell division, domain swapping, NMR spectroscopy, protein folding, p13
suc1
Biological context
The cyclin dependent kinases (CDK) drive the pro-
gression of the mitosis. In addition to the activating
cyclin protein, the kinase complex contains a small
subunit called CKS for cyclin-dependent kinase sub-
unit (Brizuela et al., 1987). CKS proteins are essential
for the entry and exit of mitosis and target the wee1
and CDC25 kinase regulators to phosphorylation by
the CDKs (Patra et al., 1999). The CKS protein
from Saccharomyces pombe, p13
suc1
, exists both in a
closed conformation (Endicott et al., 1995) and in a
C-terminal β-strand exchanged conformation (Bourne
et al., 1995; Khazanovich et al., 1996). Mutation of the
hinge proline P90 of p13
suc1
from S. pombe to alanine
has been previously shown to stabilize the protein and
to prevent swapping to occur (Rousseau et al., 1998).
We have started NMR studies of the CKS protein from
Saccharomyces pombe, p13
suc1
and the PA90 mutant.
We have shown by NMR chemical shift perturbations
that the p13
suc1
of S. pombe binds via its conserved
anion-binding site to a CDC25 phosphatase peptide
in a phosphorylation-dependent way (Landrieu, 2001;
Odaert, 2002). We present here the backbone assign-
ment of the wild type and the complete assignment for
the PA90 mutant protein.
∗
To whom correspondence should be addressed. E-mail:
B.J.E. Odaert@chem.rug.nl
Methods and experiments
Expression and purification were described previously
(Odaert et al., 2002). [
15
N] and [
15
N,
13
C]-labeled
wild-type and p13PA90 mutant proteins were ex-
pressed in the minimal medium M9 supplemented
by [
15
N] ammonium chloride (1 g l
-1
) and [
13
C]
glucose (2 g l
-1
) (Cambridge Isotopes Laborato-
ries, Cambridge, MA). NMR samples contained 1–
2 mM labeled protein in 100 mM NaCl 50 mM
Na
2
HPO
4
/NaH
2
PO
4
(pH 6.8) in 5%:95% D
2
O/H
2
O
or 100% D
2
O.
NMR data were recorded at 20
◦
C on a Bruker
DMX600 (Pasteur Lille) and on a Varian Inova 600
(GBB) equipped with a triple-resonance 5 mm probe
with a z gradient coil. Data were processed on an O2
workstation with the program SNARF v0.8.9 (Frans
van Hoesel, University of Groningen). Backbone as-
signment was achieved with the 3D triple resonance
experiments (Sattler et al., 1999): HNCA/HN(CO)CA
and HNCO/HN(CA)CO. Sidechain resonance assign-
ment was achieved with the following experiments:
HNCACB, CBCA(CO)NH, HBHA(CBCACO)NH,
(CO)N(CO)CAH (Dijkstra et al., 1997), HCCH-
TOCSY,
15
N-edited TOCSY-HSQC and
13
C-HSQC
(aromatic region). The assignment was confirmed and
completed with
15
N-edited NOESY-HSQC (100 ms
mixing time) and
13
C-edited HSQC-NOESY (36 ms
mixing time) in H
2
O and D
2
O.