Cell type–specific delivery of siRNAs with aptamer-
siRNA chimeras
James O McNamara II
1,3
, Eran R Andrechek
2,3
, Yong Wang
1
, Kristi D Viles
1
, Rachel E Rempel
2
, Eli Gilboa
1
,
Bruce A Sullenger
1
& Paloma H Giangrande
1
Technologies that mediate targeted delivery of small interfering RNAs (siRNAs) are needed to improve their therapeutic efficacy
and safety. Therefore, we have developed aptamer-siRNA chimeric RNAs capable of cell type–specific binding and delivery
of functional siRNAs into cells. The aptamer portion of the chimeras mediates binding to PSMA, a cell-surface receptor
overexpressed in prostate cancer cells and tumor vascular endothelium, whereas the siRNA portion targets the expression
of survival genes. When applied to cells expressing PSMA, these RNAs are internalized and processed by Dicer, resulting in
depletion of the siRNA target proteins and cell death. In contrast, the chimeras do not bind to or function in cells that do not
express PSMA. These reagents also specifically inhibit tumor growth and mediate tumor regression in a xenograft model of
prostate cancer. These studies demonstrate an approach for targeted delivery of siRNAs with numerous potential applications,
including cancer therapeutics.
First described in Caenorhabditis elegans, RNA interference (RNAi) is a
cellular mechanism by which 21- to 23-nucleotide RNA duplexes
trigger the degradation of cognate mRNAs
1
. The promise of RNAi-
based therapeutic applications has been apparent since the demon-
stration that exogenous small interfering RNAs (siRNAs) can silence
gene expression via the RNAi pathway in mammalian cells
2
. The
properties of RNAi that are attractive for therapeutics include (i)
stringent target-gene specificity, (ii) relatively low immunogenicity of
siRNAs and (iii) simplicity of design and testing of siRNAs.
A critical technical hurdle for RNAi-based clinical applications is
the delivery of siRNAs across the plasma membrane of cells in vivo.
A number of solutions for this problem have been described, including
cationic lipids
3
, viral vectors
4–6
, high-pressure injection
7
and
modifications of the siRNAs (e.g., chemical, lipid, steroid, protein)
8–13
.
However, most of the approaches described to date have the dis-
advantage of delivering siRNAs to cells nonspecifically, without regard
to the cell type.
For in vivo use, one would like to target therapeutic siRNA reagents
to particular cell types (e.g., cancer cells), thereby limiting side
effects that result from nonspecific delivery as well as reducing the
quantity of siRNA necessary for treatment, an important cost con-
sideration. One recent study described a promising approach in which
antibodies that bind cell type–specific cell-surface receptors were fused
to protamine and used to deliver siRNAs to cells via endocytosis
14
.
Similarly, another study described a method to specifically deliver
anti-ews-fli1 siRNAs to transferrin receptor–expressing tumors in
mice using a cyclodextrin-containing polycation bearing transferrin
as a targeting ligand
15
.
Here, we describe a completely RNA-based approach for specific
delivery of siRNAs. A number of groups have identified structured
RNAs capable of binding a variety of proteins with high affinity and
specificity with SELEX (systematic evolution of ligands by exponential
enrichment). We decided to exploit the structural potential of RNA to
target siRNAs to a cell-surface receptor specific to a particular cell
type. Our approach relies on RNAs that include both a targeting
moiety, the aptamer, and an RNA-silencing moiety, the siRNA, which
is recognized and processed by Dicer in a manner similar to the
processing of microRNAs (Fig. 1a).
We generated and tested aptamer-siRNA chimeric RNAs for their
ability to (i) specifically bind prostate cancer cells expressing the cell-
surface receptor PSMA using an RNA aptamer previously selected
against human PSMA (A10)
16
and (ii) deliver therapeutic siRNAs that
target polo-like kinase 1 (PLK1)
17
and BCL2 (ref. 3), two survival
genes overexpressed in most human tumors
18–20
. Because Dicer acts
upon the chimeric RNAs, the siRNAs are directed into the RNAi
pathway and silence their cognate mRNAs (Fig. 1a).
In contrast to most described delivery methods, this approach
involves only RNA (that is, an RNA aptamer linked to an siRNA),
an important advantage given the various side effects associated with
many commonly used reagents such as proteins. Indeed, aptamer-
siRNA chimeras present several advantages for in vivo applications.
Aptamers and siRNAs have low immunogenicity. They can easily be
synthesized in large quantities at a relatively low cost and are amenable
to a variety of chemical modifications that confer both resistance to
degradation and improved pharmacokinetics in vivo. The smaller size
of aptamers compared with that of antibodies (o15 kDa versus
Received 3 March; accepted 23 May; published online 25 June 2006; doi:10.1038/nbt1223
1
Duke Center for Translational Research, Department of Surgery,
2
Duke Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina
27710, USA.
3
These authors contributed equally to this work. Correspondence should be addressed to B.A.S. (b.sullenger@cgct.duke.edu)
NATURE BIOTECHNOLOGY VOLUME 24 NUMBER 8 AUGUST 2006 1005
ARTICLES
© 2006 Nature Publishing Group http://www.nature.com/naturebiotechnology