Linking temperature sensitivity of soil organic matter
decomposition to its molecular structure, accessibility,
and microbial physiology
ROTA WAGAI, AYAKA W. KISHIMOTO-MO, SEIICHIRO YONEMURA,
YASUHITO SHIRATO, SYUNTARO HIRADATE andYASUMI YAGASAKI
National Institute for Agro-Environmental Sciences (NIAES), Tsukuba, Ibaraki 305-8604, Japan
Abstract
Temperature sensitivity of soil organic matter (SOM) decomposition may have a significant impact on global warm-
ing. Enzyme-kinetic hypothesis suggests that decomposition of low-quality substrate (recalcitrant molecular struc-
ture) requires higher activation energy and thus has greater temperature sensitivity than that of high-quality, labile
substrate. Supporting evidence, however, relies largely on indirect indices of substrate quality. Furthermore, the
enzyme-substrate reactions that drive decomposition may be regulated by microbial physiology and/or constrained
by protective effects of soil mineral matrix. We thus tested the kinetic hypothesis by directly assessing the carbon
molecular structure of low-density fraction (LF) which represents readily accessible, mineral-free SOM pool. Using
five mineral soil samples of contrasting SOM concentrations, we conducted 30-days incubations (15, 25, and 35 °C) to
measure microbial respiration and quantified easily soluble C as well as microbial biomass C pools before and after
the incubations. Carbon structure of LFs (<1.6 and 1.6–1.8 g cm
À3
) and bulk soil was measured by solid-state
13
C-NMR. Decomposition Q
10
was significantly correlated with the abundance of aromatic plus alkyl-C relative to
O-alkyl-C groups in LFs but not in bulk soil fraction or with the indirect C quality indices based on microbial respira-
tion or biomass. The warming did not significantly change the concentration of biomass C or the three types of solu-
ble C despite two- to three-fold increase in respiration. Thus, enhanced microbial maintenance respiration (reduced
C-use efficiency) especially in the soils rich in recalcitrant LF might lead to the apparent equilibrium between SOM
solubilization and microbial C uptake. Our results showed physical fractionation coupled with direct assessment of
molecular structure as an effective approach and supported the enzyme-kinetic interpretation of widely observed C
quality-temperature relationship for short-term decomposition. Factors controlling long-term decomposition Q
10
are
more complex due to protective effect of mineral matrix and thus remain as a central question.
Keywords: activation energy, carbon molecular structure, carbon use efficiency, density fractionation, dissolved organic matter,
enzyme kinetics, soil organic matter, substrate quality, temperature dependency
Received 29 August 2012; revised version received 9 November 2012 and accepted 23 November 2012
Introduction
Decomposition of soil organic matter (SOM) has signifi-
cant impact on land-atmosphere C exchange directly
via microbial heterotrophic respiration and indirectly
by regulating nutrient availability for primary produc-
tion. Global simulation models show dramatically
different predictions of the response of soil C pool to
future warming (Jones et al., 2005; Friedlingstein et al.,
2006) because of our limited understanding on SOM
dynamics including its temperature sensitivity (David-
son & Janssens, 2006; Kirschbaum, 2006; Von L€ utzow &
K€ ogel-Knabner, 2009; Hopkins et al., 2012). The SOM
decomposition process is inherently complex due to
enormous variations in heterotrophic microorganisms,
enzymes they secrete, and their substrates (plant- and
microbially synthesized compounds at different decay-
ing stages). Moreover, those interactions with soil min-
eral particles and aggregates (e.g., sorption on mineral
surfaces, and physical protection) create wide arrays of
constrains for decomposition (Sollins et al., 1996;
Baldock & Skjemstad, 2000; Davidson & Janssens, 2006;
Gillabel et al., 2010; Schmidt et al., 2011). As a result,
there is still no accepted theory on how temperature
controls the overall response of all the substrate-
enzyme reactions involved in SOM decomposition
(Kirschbaum, 2006; Conant et al., 2011).
A leading hypothesis explaining decomposition tem-
perature sensitivity is based on thermodynamic princi-
ples applied to the enzyme-substrate reactions
occurring in soil (Bosatta &
Agren, 1999; Fierer et al.,
2005; Davidson & Janssens, 2006; Craine et al., 2010;
Conant et al., 2011). The enzyme-kinetic hypothesis
Correspondence: Rota Wagai, tel. +81 29 838 8327,
fax +81 29 838 8199, e-mail: rota@affrc.go.jp
1114 © 2012 Blackwell Publishing Ltd
Global Change Biology (2013) 19, 1114–1125, doi: 10.1111/gcb.12112