Essential metals for nitrogen fixation in a free-living
N
2
-fixing bacterium: chelation, homeostasis and high
use efficiency
J.-P. Bellenger,
1
*
†
T. Wichard,
1‡
Y. Xu
1
and
A. M. L. Kraepiel
2
1
Department of Geosciences, PEI, Guyot Hall, Princeton
University, Princeton, NJ 08544, USA.
2
Chemistry Department, PEI, Guyot Hall, Princeton
University, Princeton, NJ 08544, USA.
Summary
Biological nitrogen fixation, the main source of new
nitrogen to the Earth’s ecosystems, is catalysed by
the enzyme nitrogenase. There are three nitrogenase
isoenzymes: the Mo-nitrogenase, the V-nitrogenase
and the Fe-only nitrogenase. All three types require
iron, and two of them also require Mo or V. Metal
bioavailability has been shown to limit nitrogen fixa-
tion in natural and managed ecosystems. Here, we
report the results of a study on the metal (Mo, V, Fe)
requirements of Azotobacter vinelandii, a common
model soil diazotroph. In the growth medium of A.
vinelandii, metals are bound to strong complexing
agents (metallophores) excreted by the bacterium.
The uptake rates of the metallophore complexes are
regulated to meet the bacterial metal requirement for
diazotrophy. Under metal-replete conditions Mo, but
not V or Fe, is stored intracellularly. Under conditions
of metal limitation, intracellular metals are used with
remarkable efficiency, with essentially all the cellular
Mo and V allocated to the nitrogenase enzymes. While
the Mo-nitrogenase, which is the most efficient, is
used preferentially, all three nitrogenases contribute
to N
2 fixation in the same culture under metal limita-
tion. We conclude that A. vinelandii is well adapted to
fix nitrogen in metal-limited soil environments.
Introduction
Biological nitrogen fixation, the reaction that converts
atmospheric N
2(g) into bioavailable ammonia, is the major
natural route of entry for new nitrogen into ecosystems
(Galloway et al., 2004). As such, it is a key component of
the nitrogen cycle and one of the most important reactions
controlling ecosystem fertility (Cleveland et al., 1999;
Vitousek et al., 2002). Nitrogen fixation is catalysed by the
enzyme nitrogenase, and is carried out exclusively by
free-living or symbiotic prokaryotes. The Mo-nitrogenase,
which contains Mo at its active site (Einsle et al., 2002), is
the most common and most efficient form of the enzyme.
Two alternative nitrogenases, the V-nitrogenase and the
Fe-only nitrogenase have also been identified (Bishop
et al., 1986; Robson et al., 1986; Eady, 1996). In these
alternative nitrogenases, which are expressed when Mo
is limiting, the Mo atom is replaced by V (in the
V-nitrogenase) or Fe (in the Fe-only nitrogenase) (Eady,
2003). A recent study showed that the bioavailability of
Mo, which is one of the least abundant essential trace
metals in soils (Alloway, 1995), is further reduced by
binding to natural organic matter and adsorption to soil
particles (Wichard et al., 2009a). This is consistent with
other studies showing that Mo is a limiting nutrient for
nitrogen fixation in ecosystems ranging from the temper-
ate forests of Oregon to the tropical forests of Panama
(Silvester, 1989; Gupta, 1997; Barron et al., 2009). This
information suggests that the alternative nitrogenases
may contribute significantly to nitrogen fixation in selected
ecosystems, and possibly worldwide. Indeed, even
though only a fraction of N
2-fixing bacteria have the genes
encoding for one or both alternative nitrogenases, these
genes have been identified in a wide variety of terrestrial
environments (Betancourt et al., 2008). The V-
nitrogenase is of particular interest because V is 50–100
times more abundant than Mo in soils (Alloway, 1995),
suggesting that V could be available when Mo is not.
In addition, the V-nitrogenase is more efficient, and
expressed preferentially to the Fe-only nitrogenase
(Bishop and Joerger, 1990).
Recent studies provide a new understanding of the
uptake of Mo and V by the soil N
2-fixing bacterium Azo-
tobacter vinelandii (Bellenger et al., 2007; 2008a,b;
Wichard et al., 2008; 2009b; Kraepiel et al., 2009). They
show that strong organic ligands are excreted by the
bacteria into their growth medium and form complexes
with the available metals (i.e. Fe, Mo, V). These
Received 21 May, 2010; accepted 18 January, 2011. *For correspon-
dence. E-mail jean-philippe.bellenger@usherbrooke.ca; Tel. (+1)
819-821-7014; Fax (+1) 819-821-8017. Present addresses:
†
Dépar-
tement de Chimie, Université de Sherbrooke, Sherbrooke QC J1K
2R1, Canada;
‡
Institute for Inorganic and Analytical Chemistry,
Friedrich Schiller University Jena, Lessingtr. 8, 07743 Jena,
Germany.
Environmental Microbiology (2011) 13(6), 1395–1411 doi:10.1111/j.1462-2920.2011.02440.x
© 2011 Society for Applied Microbiology and Blackwell Publishing Ltd