UNCORRECTED PROOF
1 Support vector machine classification and characterization of age-related
2 reorganization of functional brain networks
3 Timothy B. Q1 Meier
a,
⁎, Alok S. Desphande
b
, Svyatoslav Vergun
c
, Veena A. Nair
d
, Jie Song
e
, Bharat B. Biswal
f
,
4 Mary E. Meyerand
c, e
, Rasmus M. Birn
g
, Vivek Prabhakaran
a, d
5
a
Neuroscience Training Program, University of Wisconsin-Madison, Madison, WI 53705, USA
6
b
Department of Elec. and Comp. Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA
7
c
Department of Medical Physics, University of Wisconsin-Madison, Madison, WI 53705, USA
8
d
Department of Radiology, University of Wisconsin-Madison, Madison, WI 53792, USA
9
e
Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA
10
f
Department of Radiology, University of Medicine and Dentistry of New Jersey, Newark, NJ 07103, USA
11
g
Department of Psychiatry, University of Wisconsin-Madison, Madison, WI 53719, USA
12
13
abstract article info
14 Article history:
15 Received 8 June 2011
16 Revised 13 December 2011
17 Accepted 14 December 2011
18 Available online xxxx
19 20 21
22 Keywords:
23 Machine learning
24 Resting-state fMRI
25 Aging
26 Reorganization
27 Most of what is known about the reorganization of functional brain networks that accompanies normal aging
28 is based on neuroimaging studies in which participants perform specific tasks. In these studies, reorganiza-
29 tion is defined by the differences in task activation between young and old adults. However, task activation
30 differences could be the result of differences in task performance, strategy, or motivation, and not necessarily
31 reflect reorganization. Resting-state fMRI provides a method of investigating functional brain networks with-
32 out such confounds. Here, a support vector machine (SVM) classifier was used in an attempt to differentiate
33 older adults from younger adults based on their resting-state functional connectivity. In addition, the infor-
34 mation used by the SVM was investigated to see what functional connections best differentiated younger
35 adult brains from older adult brains. Three separate resting-state scans from 26 younger adults (18–35 yrs)
36 and 26 older adults (55–85) were obtained from the International Consortium for Brain Mapping (ICBM)
37 dataset made publically available in the 1000 Functional Connectomes project www.nitrc.org/projects/
38 fcon_1000. 100 seed-regions from four functional networks with 5 mm
3
radius were defined based on a
39 recent study using machine learning classifiers on adolescent brains. Time-series for every seed-region
40 were averaged and three matrices of z-transformed correlation coefficients were created for each subject cor-
41 responding to each individual's three resting-state scans. SVM was then applied using leave-one-out cross-
42 validation. The SVM classifier was 84% accurate in classifying older and younger adult brains. The majority
43 of the connections used by the classifier to distinguish subjects by age came from seed-regions belonging
44 to the sensorimotor and cingulo-opercular networks. These results suggest that age-related decreases in pos-
45 itive correlations within the cingulo-opercular and default networks, and decreases in negative correlations
46 between the default and sensorimotor networks, are the distinguishing characteristics of age-related
47 reorganization.
48 © 2011 Published by Elsevier Inc.
49 50
51
52
53 Introduction
54 Until relatively recently, most of our knowledge regarding the
55 age-related reorganization of functional networks in the human
56 brain has been based on neuroimaging studies comparing differences
57 in task activity between younger and older adults. However, follow-
58 ing an explosion of research into resting-state functional connectivity,
59 it has been proposed that all functional networks that are utilized for
60 task performance are present during rest in the form of correlations
61 between low frequency fluctuations (Biswal et al., 1995; Smith et
62 al., 2009). Resting-state fMRI allows the investigation of age-related
63 changes in functional networks without confounds of task studies,
64 such as performance, motivation, and the use of divergent strategies.
65 Relatively few studies have attempted to characterize age-related
66 reorganization of functional networks at the brain-wide level using
67 resting-state functional connectivity (Biswal et al., 2010). In one
68 such study, Meunier et al. completed a graph theoretical analysis on
69 resting-state data investigating the effects of aging on the modular
70 organization of functional networks (2009). They found that large
71 modules, or networks, observed in young healthy adults were split
72 up into smaller modules in older adults. In addition, they observed a
NeuroImage xxx (2012) xxx–xxx
⁎ Corresponding author at: University of Wisconsin-Madison, Neuroscience Training
Program, 1310d Wisconsin Institutes for Medical Research, 1111 Highland Ave., Madi-
son, WI 53705, USA Q4 . Fax: +1 608 265 4152.
E-mail address: tbmeier@wisc.edu (T.B. Meier).
YNIMG-09029; No. of pages: 13; 4C:
1053-8119/$ – see front matter © 2011 Published by Elsevier Inc.
doi:10.1016/j.neuroimage.2011.12.052
Contents lists available at SciVerse ScienceDirect
NeuroImage
journal homepage: www.elsevier.com/locate/ynimg
Please cite this article as: Meier, T.B., et al., Support vector machine classification and characterization of age-related reorganization of func-
tional brain networks, NeuroImage (2012), doi:10.1016/j.neuroimage.2011.12.052