L-Arginine Binding to Liver Arginase Requires Proton Transfer to Gateway Residue
His141 and Coordination of the Guanidinium Group to the Dimanganese(II,II)
Center
²
Sergei V. Khangulov,*
,‡
Thomas M. Sossong, Jr.,
§
David E. Ash,
§
and G. Charles Dismukes*
,‡
Department of Chemistry, Henry H. Hoyt Laboratory, Princeton UniVersity, Princeton, New Jersey 08544, and
Department of Biochemistry, Temple UniVersity, School of Medicine, Philadelphia, PennsylVania 19140
ReceiVed NoVember 25, 1997; ReVised Manuscript ReceiVed March 16, 1998
ABSTRACT: Rat liver arginase contains a dimanganese(II,II) center per subunit that is required for catalytic
hydrolysis of L-arginine to form urea and L-ornithine. A recent crystallographic study has shown that the
Mn
2
center consists of two coordinatively inequivalent manganese(II) ions, Mn
A
and Mn
B
, bridged by a
water (hydroxide) molecule and two aspartate residues [Kanyo et al. (1996) Nature 383, 554-557]. A
conserved residue, His141, is located near the proposed substrate binding region at 4.2 Å from the bridging
solvent molecule. The present EPR studies reveal that there is no essential alteration of the Mn
2
site
upon mutation of His141 to an Asn residue, which lacks a potential acid/base residue, while the catalytic
activity of the mutant enzyme is 10 times lower Vs wild-type enzyme. The binding affinity of L-lysine,
L-arginine (substrate), and N
ω
-OH-L-arginine (type 2 binders) increases inversely with the pK
a
of the side
chain. Binding of L-lysine is more than 10 times weaker, and the substrate Michaelis constant (K
m
) is
>6-fold greater (weaker binding) in the His141Asn mutant than in wild-type arginase. L-Lysine and
N
ω
-OH-L-arginine, type 2 binders, induce extensive loss of the EPR intensity, suggesting direct coordination
to the Mn
2
center. From these data and the pH dependence of type 2 binders, we conclude that His141
functions as the base for deprotonation of the side-chain amino group of L-lysine and the substrate
guanidinium group, -NH-C(NH
2
)
2
+
and that the unprotonated side chain of these amino acids is responsible
for binding to the active site. A different class of inhibitors (type 1), including L-isoleucine, L-ornithine,
and L-citrulline, suppresses enzymatic activity, producing only minor change in the zero-field splitting of
the Mn
2
EPR signal and no change in the EPR intensity, suggestive of minimal conformational
transformation. We propose that type 1 R-amino acid inhibitors do not bind directly to either Mn ion,
but interact with the recognition site on arginase for the R-aminocarboxylate groups of the substrate. A
new mechanism for the arginase-catalyzed hydrolysis of L-arginine is proposed which has general relevance
to all binuclear hydrolases: (1) Deprotonation of substrate L-arginine(H
+
) by His141 permits entry of the
neutral guanidinium group into the buried Mn
2
region. Binding of the substrate imino group (>CdNH),
most likely to Mn
B
, is coupled to breaking of the Mn
B
-(μ-H
2
O) bond, forming a terminal aquo ligand on
Mn
A
. (2) Proton transfer from the terminal Mn
A
-aqua ligand to the substrate N
δ
-guanidino atom forms
the nucleophilic hydroxide on Mn
A
and the cationic N
δ
H
2
+
-guanidino leaving group. Protonation of the
substrate -N
δ
H
2
+
-group is likely assisted by hydrogen bonding to the juxtaposed anionic carboxylate group
of Glu277. (3) Attack of the Mn
A
-bound hydroxide at the electrophilic guanidino C-atom forms a
tetrahedral intermediate. (4) Formation of products is initiated by cleavage of the C
ǫ
-N
δ
H
2
+
bond, yielding
urea and L-ornithine(H
+
).
L-Arginine is utilized in living cells for the biosynthesis
of proteins. It is a precursor to the polyamines, used as
growth factors, and a precursor to nitric oxide (NO), used
for intracellular communication (1-3). L-Arginine is also
a primary intermediate of the urea cycle, which allows many
organisms to metabolize nitrogen-containing compounds with
excretion of urea. The concentration of L-arginine in tissues
is regulated by arginase, making this enzyme extremely
important for a variety of biochemical reactions and bio-
medical applications.
Arginases from all sources require a divalent cation
activator. The mammalian enzyme can be activated by
Mn(II), Co(II), Ni(II), Fe(II), and Cd(II), although the
physiological activator is Mn(II) (4, 5). Rat liver arginase
is a homotrimeric enzyme (6, 7), containing one binuclear
Mn(II) center, Mn
2
(II), in each subunit (8) that is required
²
This research was supported by the National Institutes of Health,
Institute of Digestive Diseases and Kidney, Grants DK45414 (G.C.D.)
and DK44841 (D.E.A.).
* Address correspondence to S.V.K. at fax, (609) 258-1980; e-mail,
khang@chemvax.princeton.edu. Address correspondence to G.C.D. at
phone, (609) 258-3949; fax, (609) 258-1980; e-mail, dismukes@
chemvax.princeton.edu.
‡
Princeton University.
§
Temple University.
8539 Biochemistry 1998, 37, 8539-8550
S0006-2960(97)02874-2 CCC: $15.00 © 1998 American Chemical Society
Published on Web 05/21/1998