http://www.iaeme.com/IJCIET/index.asp 17 editor@iaeme.com
International Journal of Computer Engineering & Technology (IJCET)
Volume 6, Issue 10, Oct 2015, pp. 17-33, Article ID: IJCET_06_10_003
Available online at
http://www.iaeme.com/IJCET/issues.asp?JType=IJCET&VType=6&IType=10
ISSN Print: 0976-6367 and ISSN Online: 0976–6375
© IAEME Publication
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A NOVEL BIO-COMPUTATIONAL MODEL
FOR MINING THE DENGUE GENE
SEQUENCES
T. Marimuthu
1
Research Scholar, Manonmaniam Sundaranar University,
Tirunelveli, Tamilnadu, India
V. Balamurugan
Department of Information Technology, AMET University,
Chennai, Tamilnadu, India
ABSTRACT
The evolution of dengue viruses has a major impact on the causes of dengue
disease around the world. The analysis and interpretation of relationship among
the dengue viruses have become a tedious problem due to the lack of
computational models. Although, the biological models available like
phylogenetic analysis which reveals the association between the dengue viruses,
the computational techniques are required for further analysis such as to find the
classification of new evolutionary virus type, DNA and RNA variation, protein
structure prediction, protein-protein interaction. In this paper, we propose a bio-
computational model called ‘Sequence Miner’ to interpret the relationship among
the dengue viruses. In addition to that, the proposed model performs the
classification among the given set of gene sequences based on novel periodic
association rules and visualizing the results through the interactive tool. If the
structure of a protein is known, it would be easier for the biologist to infer the
function of the protein. However, it is still costly to decide the structure of a
protein via biological models. On the contrary, protein sequences are relatively
easy to obtain. Therefore, it is desirable that a protein’s structure can be decided
from its sequence through computational models. The accuracy of the proposed
model is 96.74 % which is calculated by giving the 10,735 varying length of the
sequences as the input, 10, 198 sequences are correctly classified.
Key words: DNA, RNA, Protein, classification, periodic association rules,
phylogenetic tree and dengue virus.
Cite this Article: Marimuthu, T. and Balamurugan, V. A Novel Bio-
Computational Model for Mining the Dengue Gene Sequences. International
Journal of Computer Engineering and Technology, 6(10), 2015, pp. 17-33.
http://www.iaeme.com/IJCET/issues.asp?JType=IJCET&VType=6&IType=10