Fractionation of silicon isotopes in liquids: The importance of
configurational disorder
Romain Dupuis
a,b,
⁎, Magali Benoit
b
, Elise Nardin
a
, Merlin Méheut
a
a
GET, CNRS UMR 5563, IRD UR 154, Université Paul-Sabatier, Observatoire Midi-Pyrénées, 14 avenue Edouard Belin, 31400 Toulouse, France
b
CEMES CNRS UPR8011, 29 rue Jeanne Marvig, 31055 Toulouse Cedex, France
abstract article info
Article history:
Received 5 July 2014
Received in revised form 29 December 2014
Accepted 30 December 2014
Available online 9 January 2015
Editor: Carla M Koretsky
Keywords:
Silica precipitation
Silicon isotopes
Stable isotope fractionation
Molecular dynamics
First-principles calculations
Dissolved silicon
Silicon isotopes are a promising tool to assess low-temperature geochemical processes such as weathering or
chert precipitation. However, their use is hampered by an insufficient understanding of the fractionation
associated with elementary processes such as precipitation or dissolution. In particular, the respective contributions
of kinetic and equilibrium processes remain to be determined. In this work, equilibrium fractionation factors for
silicon isotopes have been calculated using first-principles methods for quartz, kaolinite, and dissolved silicic acid
(H
4
SiO
4
and H
3
SiO
4
−
) at 300 K.
The two liquid systems are treated both as realistically as possible, and as consistently with the solids as possible.
They are first simulated by ab initio molecular dynamics, then individual snapshots are extracted from the trajec-
tories and relaxed, giving inherent structures (IS). The fractionation properties of these IS are then calculated. A
significant variability of the fractionation properties (σ = 0.4‰) is observed between the independent snapshots,
emphasizing the importance of configurational disorder on the fractionation properties of solutions. Further-
more, a correlation is observed between the fractionation properties of these snapshots and the mean Si–O dis-
tances, consistent with calculations on minerals. This correlation is used to identify other parameters influencing
the fractionation, such as the solvation layer. It is also used to reduce the number of configurations to be comput-
ed, and therefore the computational cost.
At 300 K, we find a fractionation factor of +2.1 ± 0.2‰ between quartz and H
4
SiO
4
, +0.4 ± 0.2‰ between ka-
olinite and H
4
SiO
4
, and −1.6 ± 0.3‰ between H
3
SiO
4
−
and H
4
SiO
4
. These calculated solid–solution fractionations
show important disagreement with natural observations in low-temperature systems, arguing against isotopic
equilibration during silicon precipitation in these environments. On the other hand, the large fractionation
associated with the de-protonation of silicic acid suggests the importance of speciation, and in particular pH,
for the fractionation of silicon isotopes at low temperature.
© 2015 Elsevier B.V. All rights reserved.
1. Introduction
Due to analytical progress, silicon isotopes have recently emerged as
a promising tool for estimating the impact of alteration on the
long-term CO
2
budget (Opfergelt and Delmelle, 2012, and references
therein), understanding soil formation (Ziegler et al., 2005), or
constraining oceanic productivity (De La Rocha et al., 1998). Although
numerous studies have measured silicon isotope compositions in
natural samples, very few document quantitatively the fractionation re-
lated to elementary processes. A quantitative understanding of
the basic mechanisms causing isotopic fractionation is nevertheless es-
sential to realize the full potential of this isotopic system, and can be
attained through careful theoretical studies and laboratory experiments.
Such experiments are difficult to realize, due in particular to the slow
speed of Si precipitation, and to the complexity of alteration processes.
So far, the identified causes for isotopic variability in these surface
environments are inorganic precipitation of clays or silica (Li et al.,
1995; Basile-Doelsch, et al., 2005; Georg et al., 2007; Geilert et al.,
2014), organic precipitation of silica (de la Rocha et al., 1997; Hendry
and Robinson, 2012), dissolution of silica (Demarest et al., 2009), or ad-
sorption of silica onto oxides (Delstanche, et al., 2009). In all these sit-
uations, the fractionation occurs between a solid and a liquid phase.
In order to interpret these observations, and in particular to under-
stand the relative contribution of kinetic and equilibrium processes, it
is of primary importance to document fractionations related to the
equilibria between minerals and liquids, and between different dis-
solved species. The most common species of Si in solution at ambient
conditions are silicic acid H
4
SiO
4
(aq) (denoted hereafter H4), and its
associated base H
3
SiO
4
−
(aq) (denoted hereafter H3). In this work, we
will focus on the isotopic fractionation between these two species and
between H
4
SiO
4
and two minerals, quartz and kaolinite. The calculated
quartz/solution fractionation can be compared with the existing esti-
mates of fractionation during precipitation of amorphous silica, whereas
the kaolinite/solution fractionation is more relevant to the behavior of Si
isotopes during clay precipitation.
Chemical Geology 396 (2015) 239–254
⁎ Corresponding author.
E-mail address: rdupuisbelin@gmail.com (R. Dupuis).
http://dx.doi.org/10.1016/j.chemgeo.2014.12.027
0009-2541/© 2015 Elsevier B.V. All rights reserved.
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