Thermophilic anaerobes in Arctic marine sediments
induced to mineralize complex organic matter at
high temperature
Casey Hubert,
1
*
†
Carol Arnosti,
2
Volker Brüchert,
1‡
Alexander Loy,
3
Verona Vandieken
1§
and
Bo Barker Jørgensen
1,4
1
Department of Biogeochemistry, Max Planck Institute
for Marine Microbiology, Bremen, Germany.
2
Department of Marine Sciences, University of North
Carolina, Chapel Hill, NC, USA.
3
Department of Microbial Ecology, University of Vienna,
Vienna, Austria.
4
Center for Geomicrobiology, Aarhus University, Aarhus,
Denmark.
Summary
Marine sediments harbour diverse populations of
dormant thermophilic bacterial spores that become
active in sediment incubation experiments at much
higher than in situ temperature. This response was
investigated in the presence of natural complex
organic matter in sediments of two Arctic fjords, as
well as with the addition of freeze-dried Spirulina or
individual high-molecular-weight polysaccharides.
During 50°C incubation experiments, Arctic thermo-
philes catalysed extensive mineralization of the
organic matter via extracellular enzymatic hydrolysis,
fermentation and sulfate reduction. This high
temperature-induced food chain mirrors sediment
microbial processes occurring at cold in situ tem-
peratures (near 0°C), yet it is catalysed by a com-
pletely different set of microorganisms. Using sulfate
reduction rates (SRR) as a proxy for organic matter
mineralization showed that differences in organic
matter reactivity determined the extent of the thermo-
philic response. Fjord sediments with higher in situ
SRR also supported higher SRR at 50°C. Amendment
with Spirulina significantly increased volatile fatty
acids production and SRR relative to unamended
sediment in 50°C incubations. Spirulina amendment
also revealed temporally distinct sulfate reduction
phases, consistent with 16S rRNA clone library detec-
tion of multiple thermophilic Desulfotomaculum spp.
enriched at 50°C. Incubations with four different fluo-
rescently labelled polysaccharides at 4°C and 50°C
showed that the thermophilic population in Arctic
sediments produce a different suite of polymer-
hydrolysing enzymes than those used in situ by
the cold-adapted microbial community. Over time,
dormant marine microorganisms like these are buried
in marine sediments and might eventually encounter
warmer conditions that favour their activation. Dis-
tinct enzymatic capacities for organic polymer degra-
dation could allow specific heterotrophic populations
like these to play a role in sustaining microbial
metabolism in the deep, warm, marine biosphere.
Introduction
Anaerobic microbial communities catalyse the degrada-
tion of organic matter in marine sediments. Particles
reaching the seafloor are comprised of a complex mixture
of carbohydrate, protein, nucleic acid and lipid molecules
that are generally too large for direct microbial uptake
(Weiss et al., 1991; Hedges et al., 2001; Arnosti, 2004).
Initial depolymerization steps in anaerobic degradation
pathways involve microbial production of extracellular
enzymes. Hydrolytic cleavage of large substrates results
in smaller monomeric products for cell internal uptake and
metabolism. The ability of microbial communities to
access and degrade complex organic compounds in
surface sediments determines the fraction of sediment
organic matter that is mineralized and that which is per-
manently buried (Burdige, 2007). Initial hydrolysis thus
sets off a cascade of transformations in which products of
hydrolysis may be rapidly degraded by fermentation and
anaerobic respiration (Arnosti, 2004). These sediment
processes are depicted schematically in Fig. 1. In anoxic
marine surface sediments where sulfate is abundant,
microbial sulfate reduction is generally the dominant ter-
minal mineralization step (Jørgensen, 1982; 2006; Fig. 1).
In many shelf sediments, high sulfate reduction rates
(SRR) therefore indicate an active reaction cascade and
Received 22 August, 2009; accepted 14 December, 2009. *For cor-
respondence. E-mail casey.hubert@newcastle.ac.uk; Tel. (+44) 191
246 4864; Fax (+44) 191 222 6502. Present addresses:
†
School of
Civil Engineering and Geosciences, Newcastle University, Newcastle
Upon Tyne, UK;
‡
Department of Geology and Geochemistry, Stock-
holm University, Stockholm, Sweden;
§
Institute of Biology, University
of Southern Denmark, Odense, Denmark.
Environmental Microbiology (2010) 12(4), 1089–1104 doi:10.1111/j.1462-2920.2010.02161.x
© 2010 Society for Applied Microbiology and Blackwell Publishing Ltd