Study of Water Binding to Low-Spin Fe(III) in Cytochrome
P450 by Pulsed ENDOR and Four-Pulse ESEEM
Spectroscopies
D. Goldfarb,*
,²,‡
M. Bernardo,
§
H. Thomann,*
,§
P. M. H. Kroneck,
⊥
and V. Ullrich
⊥
Contribution from the Department of Chemical Physics, The Weizmann Institute of Science,
RehoVot 76100, Israel, Exxon Research and Engineering Co., Route 22 East,
Annandale, New Jersey 08801, and Faculty of Biology, UniVersity of Konstanz,
UniVersita ˚ tstrasse 10, D-78434 Konstanz, Germany
ReceiVed April 24, 1995
X
Abstract: Cytochrome P450cam (CP450cam) was studied by pulsed ENDOR and two- and four-pulse ESEEM
spectroscopies. Spectra were recorded and simulated at the three principal g-values of the rhombic EPR spectrum.
The four-pulse ESEEM experiment gave a direct measure of the anisotropic hyperfine interaction for the protons.
Using the point dipole approximation this gives a Fe-H distance of 2.6 Å. The measured anisotropic hyperfine
interaction reduced the number of hyperfine interaction parameters required to simulate the ENDOR line shapes.
Both the four-pulse ESEEM frequencies and the ENDOR spectra at all three principal g-values could be satisfactorily
simulated using two magnetically equivalent protons and a water orientation similar to that obtained in our previous
17
O ESEEM study. Thus, the pulsed ENDOR and four-pulse ESEEM results are self-consistent with the
17
O ESEEM
data and indicate that the axial ligand is a water molecule rather than an OH
-
ligand. The isotropic hyperfine value
derived from the numerical simulations is in agreement with previous values derived from proton NMR relaxation
studies.
Introduction
Cytochrome P450 (CP450) enzymes are ubiquitous O
2
activators consisting of a protoporphyrin IX prosthetic group
as the active site.
1-4
The best characterized CP450 enzyme is
the CP450 camphor from Pseudomonas Putida(CP450cam) for
which several high-resolution crystal structures were reported.
5-9
In the substrate free CP450cam enzyme the Fe
3+
is low spin
and hexacoordinated.
5
Upon camphor binding the Fe
3+
becomes
high-spin and pentacoordinated.
6,7,10
A cysteine thiolate sulfur
constitutes the proximal ligand which remains bound to the
metal upon substrate binding. From X-ray diffraction studies
it has been concluded that the distal ligand, which is removed
upon camphor binding, is either a water molecule or a hydroxide
ion, with a Fe-O distance of 2.28 Å.
5
The possible mechanisms relating the substrate binding, the
coordination number, the spin state equilibrium, and the redox
potential where discussed by Poulos and Raag.
9,11
These authors
also argued that OH
-
is the more likely sixth axial ligand. Room
temperature NMR relaxation measurements on substrate free
P450cam showed a significant enhancement of the water proton
relaxation
12
indicating that one or more strongly exchangeable
protons, with an isotropic hyperfine constant of 2.2-3.1 MHz,
are within 2.6-2.9 Å from the heme iron.
13
Electron nuclear
double resonance (ENDOR) measurements also showed the
existence of strongly coupled exchangeable proton(s) with
hyperfine splittings that are in agreement with the NMR
results.
14
The possibility that the signal is due to proton(s)
bound to the cysteinyl sulfur could not, however, be ruled out.
14
In a recent communication the two broad ENDOR peaks
corresponding to proton couplings of 10 and 15.2 MHz were
attributed to H
2
O signals in two major conformational substates
of the H
2
O cluster in the distal heme pocket.
15
Recently, the binding characteristics of the distal ligand in
substrate free CP450cam were measured using
17
O electron
spin-echo envelope modulation (ESEEM) spectroscopy of the
enzyme after exchange with H
2
17
O.
16
From the ESEEM results
the
17
O hyperfine and nuclear quadrupole interaction parameters
were determined. Based on the magnitude and orientation of
the quadrupole interaction it was concluded that at pH 7.5, the
distal ligand is a water molecule rather than OH
-
. The water
molecule was found to be oriented with the H-O-H bisector
parallel to the g
z
direction which is approximately perpendicular
* Authors to whom correspondence may be addressed.
²
Work by performed while on sabbatical leave at Exxon from 8/92 to
8/93.
‡
The Weizmann Institute of Science.
§
Exxon Research and Engineering Co.
⊥
University of Konstanz.
X
Abstract published in AdVance ACS Abstracts, March 1, 1996.
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0002-7863/96/1518-2686$12.00/0 © 1996 American Chemical Society