Wavelet Algorithm for Solving Integral Equations of
Molecular Liquids. A Test for the Reference Interaction
Site Model
GENNADY N. CHUEV,
1
MAXIM V. FEDOROV
1,2
1
Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Pushchino,
Moscow Region, 142290, Russia
2
Theory and Computation Group, Centre for Synthesis and Chemical Biology, Conway Institute
of Biomolecular and Biomedical Research, Department of Chemistry, University College Dublin,
Belfield, Dublin 4, Ireland
Received 9 December 2003; Accepted 26 March 2004
DOI 10.1002/jcc.20068
Published online in Wiley InterScience (www.interscience.wiley.com).
Abstract: A new efficient method is developed for solving integral equations based on the reference interaction site
model (RISM) of molecular liquids. The method proposes the expansion of site–site correlation functions into the
wavelet series and further calculations of the approximating coefficients. To solve the integral equations we have applied
the hybrid scheme in which the coarse part of the solution is calculated by wavelets with the use of the Newton–Raphson
procedure, while the fine part is evaluated by the direct iterations. The Coifman 2 basis set is employed for the wavelet
treatment of the coarse solution. This wavelet basis set provides compact and accurate approximation of site–site
correlation functions so that the number of basis functions and the amplitude of the fine part of solution decrease
sufficiently with respect to those obtained by the conventional scheme. The efficiency of the method is tested by
calculations of SPC/E model of water. The results indicated that the total CPU time to obtain solution by the proposed
procedure reduces to 20% of that required for the conventional hybrid method.
© 2004 Wiley Periodicals, Inc. J Comput Chem 25: 1369 –1377, 2004
Key words: integral equations; wavelet basis set; reference interaction model; water; hybrid scheme
Introduction
Computer simulations of molecular liquids are a very powerful and
useful instrument; unfortunately, they are limited by high compu-
tational costs and extensive computational resources. The integral
equation theory
1–28
provides an alternative technique with low
computational costs required to treat molecular effects in liquids.
At present there are several main approaches based on integral
equations. The first one is the reference interaction site model
(RISM) pioneered by Chandler and Andersen
1
and then extended
to the dipolar liquids by the XRISM treatment.
4,5
The theory is
based on calculations of radial distribution functions (RDF) via the
site–site Ornstein–Zernike (SSOZ) integral equation. The theory
has been successfully applied to calculate the structural and ther-
modynamic properties of various chemical and biological sys-
tems.
3,6
Recently, three-dimensional (3D) extensions of the RISM
theory have been developed to obtain 3D correlation functions of
interaction sites of solvent molecules around a solute of arbitrary
shape.
7–18
The 3D RISM theory has been used to evaluate in
details solvation structure for bulk water,
7,8,11
polar and nonpolar
molecules in water,
15
complex organic molecular ions in a polar
solvent,
14
and ion pairs in an aqueous electrolyte solution.
17,18
The
molecular Ornstein–Zernike (MOZ) theory is another method to
calculate 3D solvation structure in molecular liquids. The MOZ
theory treats the orientation dependence of intermolecular interac-
tions through the rotational invariant expansions of interaction
potentials and correlation functions.
19
The recent MOZ calcula-
tions
20 –24
have indicated that the theory is able to reproduce the
thermodynamic, dielectric, and structural properties for aprotic
solvents.
Concerning the numerical schemes for the solving integral
equations, we note that most of the current methods are based on
the Fourier transform of integral equations and apply discretization
of r - and k -spaces by choosing a grid with a large number of
points. As a result, the problem reduces to calculations of a huge
Correspondence to: G. N. Chuev; e-mail: genchuev@rambler.ru
Contract/grant sponsors: Russian Foundation for Basic Research and the
Centre for Synthesis and Chemical Biology.
© 2004 Wiley Periodicals, Inc.