Intermolecular Bonding Features in Solid Iodine
Published as part of the Crystal Growth & Design Mikhail Antipin Memorial virtual special issue
Federica Bertolotti,*
,†
Anastasia V. Shishkina,*
,‡
Alessandra Forni,
§
Giuliana Gervasio,
†
Adam I. Stash,
∥
and Vladimir G. Tsirelson
‡
†
Department of Chemistry, University of Turin, Via P. Giuria 7, 10125 Turin, Italy
‡
D.I. Mendeleev University of Chemical Technology, Miusskaya Square 9, 125047 Moscow, Russia
§
CNR-ISTM (Institute of Molecular Science and Technology), University of Milan, Via Golgi 19, 20133 Milan, Italy
∥
L.Ya. Karpov Institute of Physical Chemistry, ul. Vorontsovo Pole 10, 103064 Moscow, Russia
* S Supporting Information
ABSTRACT: A detailed description of the ability of halogen bonding to control
recognition, self-organization, and self-assembly in I
2
crystal, combining low-temperature
X-ray diffraction experiments and theoretical DFT-D and MP2 studies of charge density, is
reported. The bond critical point features were analyzed using the bonding ellipsoids, in
order to make them more evident and easier to compare. We showed that one-electron
potential, in contrast to Laplacian of electron density, allows the electron concentration and
depletion regions in the valence shell of the iodine atoms to be revealed. Thus, it was
demonstrated as an effective tool for understanding the molecular recognition processes in
iodine crystal, describing the mutually complementary areas of concentration and depletion
of electron density in adjacent molecules. This finding was also confirmed in terms of
electrostatic potential, especially using the concept of σ-hole. The tiny features of the
electrostatic component of halogen−halogen interactions were also visualized through the
superposition of the gradient fields of electron density and electrostatic potential. The
general picture provided significant arguments supporting the distinction between Type-I
(van der Waals) and Type-II (Lewis molecular recognition mechanism) I··I interactions. The energies of these interactions,
evaluated on the basis of empirical relationships with bond critical points parameters, have allowed estimating the lattice energy
for crystalline I
2
, which has been found in reasonable agreement with the experimental sublimation energy.
■
INTRODUCTION
Intermolecular interactions are important in assembly of
molecular and supramolecular systems.
1
Among them halogen
bonding (XB), a widely occurring type of noncovalent
interaction, is now the focus of many studies.
2
It is well
established that a covalently bonded halogen atom is able to
simultaneously interact with both the negative and positive sites
of neighboring molecules due to its strong atomic electron
density (ED) anisotropy.
3
Therefore, the XB interactions play
an important role in molecular recognition processes,
4
supramolecular chemistry,
5
and crystal engineering.
6
The nature of XB has been discussed for several decades
from different viewpoints.
7
Conventional X-ray crystallography,
Raman and microwave spectroscopy might provide a lot of
empirical information about XB interactions that could be
completed through quantum chemical calculations. However,
owing to the very wide range (5−180 kJ/mol) of XB energies,
where the weak Cl···Cl interactions in chlorocarbons and the
very strong I
−
···I
2
ones in I
3−
complexes are the extremes,
8
there are contradictory data about the nature of these
interatomic interactions. Some works show its primarily
electrostatic character,
9
with small contributions coming from
second-order terms, such as polarization, dispersion, and charge
transfer.
10
Other studies
11
highlighted that the electron density
transfer, from the lone pair of the Lewis base to the σ*
C−X
antibonding orbital or to outer portions of the halogenated
molecule, can be in some cases competitive with the
electrostatic contribution.
In the past decade, a lot of work has been done in order to
analyze the features of ED in the XB intermolecular region in
molecular complexes and crystals.
12
The quantum theory of
atoms in molecules and crystals (QTAIMC)
13
plays a
significant role in these studies because it offers a consistent
way of reconstruction of the atomic interactions in many-
electron multinuclear systems, whose accurate wave function is
computed or high resolution ED is measured. The QTAIMC
features, such as the bounded atoms separated by the zero-flux
surfaces of the gradient of ED, the critical points (CPs), and the
lines of maximum density between nuclei (the bond paths,
BPs),
14
yield a crystal structure description at the level of the
bonding details.
15
In the majority of cases, BPs and associated
bond critical points (BCPs) occur between pairs of atoms that
Received: April 14, 2014
Revised: May 24, 2014
Published: May 30, 2014
Article
pubs.acs.org/crystal
© 2014 American Chemical Society 3587 dx.doi.org/10.1021/cg5005159 | Cryst. Growth Des. 2014, 14, 3587−3595