Synthesis and X‑ray Structures of Novel Macrocycles and
Macrobicycles Containing N,N-Di(pyrrolylmethyl)‑N‑methylamine
Moiety: Preliminary Anion Binding Study
Rajnish Kumar, Tapas Guchhait, and Ganesan Mani*
Department of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
* S Supporting Information
ABSTRACT: The [2 + 2] Schiff base condensation reactions
between the newly synthesized dialdehyde, N,N-di(α-for-
mylpyrrolyl-α-methyl)-N-methylamine), and ethylenediamine
or p-phenylenediamine dihydrochloride readily afforded the
30- and 34-membered large size macrocycles in very high
yields. Subsequent reduction reactions of these macrocycles
with NaBH
4
gave the corresponding saturated macrocyclic
hexaamines in good yields. The analogous reaction of the new
dialdehyde with a triamine molecule afforded the [3 + 2] Schiff
base macrobicycle in high yield, which was then reduced by
reaction with NaBH
4
to give the saturated macrobicycle. All
these compounds were characterized by spectroscopic
methods. The anion binding properties of the saturated
macrocycles having the ethylene and the phenylene linkers in
CDCl
3
were studied by NMR titration methods. Although they have similar pyrrolic and amine NH groups their binding
properties are different and interesting, owing to the conformational flexibility or rigidness rendered by the ethylene or phenylene
groups, respectively. The macrocycle having the ethylene linkers binds anions in a 1:1 fashion, while the other receptor having
the phenylene linkers prefers to bind anions in a sequential 1:2 fashion and has a multiple equilibria between a 1:1 and a 1:2
complexes, as shown by their binding constants, curve fittings by EQNMR, and Job plots. The X-ray structures of the 1:2
methanol, the aqua and the benzoate anion complexes of the macrocycles show two cavities in which the guests are bound,
correlating with the high affinity found for the formation of stable 1:2 complexes in solution. The X-ray structure showed that the
macrobicycle Schiff base adopts an eclipsed paddle-wheel shaped conformation and exhibits an out-out configuration at the
bridgehead nitrogen atoms.
■
INTRODUCTION
The driving force for design and synthesis of artificial synthetic
receptors for anions, inspired by selective anion recognition in
nature, comes from biological, environmental, and industrial
point of views.
1
Because of the inherent nature of the anions,
developing synthetic receptors that recognize anions primarily
by means of covalent or noncovalent interactions is a
challenging task and remains an active area of research.
2,3
Among the various types of systems, pyrrole-based receptors in
which Sessler and co-workers pioneered
4
have attracted
attention as they form strong hydrogen bonding interactions
with anions because of the acidic nature of the NH group.
5
Typically these pyrrole-based receptors have been synthesized
by making use of the active α-positions of the pyrrole ring
which has led to various sizes of macrocycles
6
and macrobi-
cycles
7
incorporating both steric and electronic factors for
recognizing and binding various types of anions.
Alternatively, anion receptors have also been synthesized by
anion-templated
8
[2 + 2] Schiff base condensation reactions of
pyrrole systems, which often give the desired large size Schiff
bases in excellent yields which is essential for further
applications.
9
In addition, these Schiff bases are reduced to
give receptor molecules carrying additional hydrogen bonding
NH groups for strongly interacting with an anion.
10
Usually
large macrocyclic receptors are flexible and preorganized for
ready binding with anions. One of the key strategies for
synthesizing a large size pyrrole-based anion receptor which
might have favorable conformation suitable for a specific anion
is through varying the spacer unit between two pyrrolide units,
A as shown in Chart 1. Macrocycles and macrobicycles
11
formed by these pyrrole systems have been used in studies such
Received: June 4, 2012
Published: August 7, 2012
Chart 1. Dialdehyde Derivatives for Schiff Base
Condensation Reactions
Article
pubs.acs.org/IC
© 2012 American Chemical Society 9029 dx.doi.org/10.1021/ic3011822 | Inorg. Chem. 2012, 51, 9029-9038