Plant Pathology (2006) 55, 286 Doi: 10.1111/j.1365-3059.2005.01273.x
286 © 2006 BSPP
Blackwell Publishing, Ltd.
Occurrence of Sweet potato leaf curl virus in Sicily
R. W. Briddon*, S. E. Bull and I. D. Bedford
Department of Disease and Stress Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK
The Ipomoea-infecting begomoviruses are an evolutionary curiosity. Two
such viruses have been identified: Sweet potato leaf curl virus (SPLCV;
Lotrakul & Valverde, 1999) and Sweet potato leaf curl Georgia virus
(SPLCGV), originating from the USA (SPLCV and SPLCGV) and Spain
[SPLCV-Ipo, previously known as Ipomoea yellow vein virus (Banks et al.,
1999) but now recognized as a distinct strain of SPLCV]. These viruses are
monopartite (no DNA B or DNA β component has been identified for any
of the viruses), have a genome organization typical of Old World begomo-
viruses, and are distinct from all other begomoviruses.
Cuttings of Ipomoea indica (Convolvulaceae) showing yellow vein
symptoms were collected in the vicinity of Catania, Sicily in 1999. A
full-length clone of the begomovirus associated with the disease was
produced by PCR-mediated amplification with a pair of primers abutting
at their 5′ ends and spanning (for SPLCV-Ipo) nucleotides 697–758
(virion-sense primer 5′ -GGATCCGCTGAACTTTGGCCAGATCTTC-
ACTATG-3′; complementary-sense primer 5′-GGATCCTTATTGGGC-
CTTGTATCACGAATCAACC-3′). These were designed to the sequence
of SPLCV-Ipo (EMBL accession number AJ132548) and span a unique
BamHI restriction endonuclease site. The full-length PCR product was
cloned into the T-Easy vector (Promega) and the sequence of a single
clone was determined. This sequence (accession no. AJ586885) is 2830
nucleotides long and shows the arrangement of genes typical of the
genomes (or DNA A components) of Old World begomoviruses. The
virus is closely related to other begomoviruses isolated from Ipomoea spp.,
including SPLCGV (84·2% nucleotide sequence identity), SPLCV (89·9%)
and SPLCV-Ipo (90·9%), with which it clusters in phylogenetic analyses.
We conclude that the isolate originating from Sicily is a strain of SPLCV
which is provisionally designated SPLCV-[Sicily]. The occurrence of this
begomovirus species in Sicily indicates that its geographical range extends
further across the Mediterranean basin than previously identified.
References
Banks G, Bedford ID, Markham PG, 1999. A novel geminivirus of Ipomoea
indica (Convolvulaceae) from southern Spain. Plant Disease 83, 486.
Lotrakul P, Valverde RA, 1999. Cloning of a DNA A-like component of sweet
potato leaf curl virus: nucleotide sequence and phylogenetic relationships.
Molecular Plant Pathology Online www.bspp.org.uk/mppol/1999/
0422lotrakul / index.htm
*E-mail: robbriddon@nibge.org Accepted 10 May 2005 at www.bspp.org.uk/ndr where figures relating to this paper can be viewed.
Plant Pathology (2006) 55, 286 Doi: 10.1111/j.1365-3059.2005.01300.x
Blackwell Publishing Ltd
First report of a begomovirus associated with the common weed
Jatropha gossypifolia in Jamaica
M. E. Roye
a
*, A. M. Collins
a
and D. P. Maxwell
b
a
Biotechnology Centre, University of the West Indies, Mona, Kingston 7, Jamaica; and
b
Department of Plant Pathology, University of Wisconsin-Madison, 1630 Linden Drive, Madison WI 53706, USA
Plants of the common weed Jatropha gossypifolia with yellow mosaic
symptoms typical of geminivirus infection are often found growing among
crops such as tomato, bean and pepper in Jamaica. These crops are known
to be hosts to several begomoviruses in Jamaica (Roye et al., 1999). Leaf
tissue of J. gossypifolia plants showing these symptoms was obtained from
several agricultural sites, and genomic DNA was extracted using a
modified Dellaporta method (Rojas et al., 1993). Low-stringency hybrid-
ization using a digoxygenin-labelled DNA-A probe of Bean golden yellow
mosaic virus (BGYMV) from Jamaica produced positive signals for all 10
samples tested. PCR using degenerate primers PAC1v, 1978/PAV1c715
and PBC1v 2039/PBV1c800 (Rojas et al., 1993) amplified c. 1·3 kb
fragments of the begomovirus DNA-A and DNA-B, respectively. The
fragments obtained from both DNA-A and DNA-B were cloned and
sequenced: 1419 nt for DNA-A (accession number AF324410) and 1410
nt for DNA-B (AF324411) were obtained. A similarity search (blastn) for
the DNA-A sequence showed that it was most similar (90%) to Tobacco
leaf rugose virus from Cuba over 870 nt, but showed no significant simi-
larity to DNA sequences in the database for the DNA-B. Nucleotide
sequence analysis of DNA-A and DNA-B fragments revealed that they
shared an intergenic region of 188 nt that was 95% identical. Further
DNA-A sequence analysis with several begomoviruses from the Western
Hemisphere indicated that, over the entire 1·4 kb fragment, the virus was
most similar to Sida golden mosaic virus from Jamaica (80%) and Tobacco
leaf rugose virus (79%). The weed virus was distinct from several weed-
infecting begomoviruses from the Latin American region, including
begomoviruses associated with Sida, Rhychosia and Macroptilium spp.
This is the first report of a begomovirus associated with J. gossypifolia in
Jamaica, which has been tentatively named Jatropha mosaic virus (JMV).
Acknowledgements
The authors would like to thank The Principal’s New Initiative Pro-
gramme at the University of the West Indies, Mona for funds to do this
research.
References
Rojas MR, Gilbertson RL, Russell DR, Maxwell DP, 1993. Use of degenerate
primers in the polymerase chain reaction to detect whitefly-transmitted
geminiviruses. Plant Disease 77, 340–7.
Roye ME, Wernecke ME, McLaughlin WA, Nakhla MK, Maxwell DP, 1999.
Tomato dwarf leaf curl virus, a new bipartite geminivirus associated with
tomatoes and peppers in Jamaica and mixed infection with tomato yellow
leaf curl virus. Plant Pathology 48, 370–8.
*E-mail: marcia.roye@uwimona.edu.jm Accepted 27 June 2005 at www.bspp.org.uk/ndr where figures relating to this paper can be viewed.