Molecular Immunology 42 (2005) 1485–1493 Porcine TCR CD3-chain and -chain Ryuji Yamamoto a,b , Tamaki Isobe b , Tomoko Eguchi b , Wei-Ran Tang c , Nobutaka Kiyokawa c , Hiroshi Amemiya d , Junichiro Fujimoto c , Eimei Sato a , Yohtaroh Takagaki e , Hiroshi Yasue b, a Graduate School of Agricultural Science, Tohoku University, 1-1 Tsutsumi-dori Amamiya-machi, Aoba, Sendai 981-8555, Japan b Genome Research Department, National Institute of Agrobiological Sciences, 2 Ikenodai, Tsukuba, Ibaraki 305-0901, Japan c Department of Developmental Biology, National Research Institute for Child Health and Development, Setagaya-ku, Tokyo 154-8567, Japan d Department of Innovative Surgery, National Research Institute for Child Health and Development, Setagaya-ku, Tokyo 154-8567, Japan e Department of Molecular Genetics, Graduate School of Medical Sciences, Kitasato University, 1-15-1 Kitasato, Sagamihara, 228-8555, Japan Received 5 October 2004; accepted 18 January 2005 Available online 16 March 2005 Abstract Complete porcine CD3-chain cDNA sequence was obtained for the first time, and its genomic nucleotide sequence was investigated from exon 2 down to CD3-chain exon 8. The sequence of porcine CD3-chain showed homologous amino acid sequence with human and murine counterparts, in contrast to CD3-chain exon 8 with diversity among animals previously investigated. CD3-chain peptide is an alternative splice form of CD3-chain exon 7 splicing to CD3-chain exon 8 instead of CD3-chain exon 8. The genomic sequences revealed that the splice acceptor sequences of CD3-chain exon 8 of all animals investigated to be completely uniform. Further, CD3-chain exon 8 amino acid sequences retained the unique characters of having high proline (Pro) and positively charged amino acid content except for rats and mice. Although the biological role of CD3-chain remains to be enigmatic, these evidences suggests the evolutional pressure to maintain its sequence. © 2005 Elsevier Ltd. All rights reserved. Keywords: Swine; CD3; CD3; Alternative splicing 1. Introduction Antigen specific immune response is initiated by the recognition of foreign antigen (Ag) by T cell receptor (TCR) complex. The TCR complex consists of clonotypic Ag recog- nition elements, either TCR - and -chain heterodimers or TCR - and -chain heterodimers, and a group of invariant subunits including the three related CD3 components (-, -, and -chains), and the structurally distinct CD3-chain. Although  T-cells and  T-cells are known to recognize antigens in different manner, both sets of clonotypic TCR heterodimers are complexed with common CD3 chain fam- ily members (Baniyash et al., 1988; Borst et al., 1983a,b; Oettgen et al., 1986; Samelson et al., 1985). Corresponding author. Tel.: +81 29 838 8664; fax: +81 29 838 8674. E-mail address: hyasue@affrc.go.jp (H. Yasue). The CD3-chain (also called TCR-chain) and CD3- chain are most recently identified member among the CD3 chain family members (Weissman et al., 1986). In mice, large majority (90%) of CD3-chains exist as disulfide- linked CD3–CD3homodimers, with the remainder being CD3–CD3(Baniyash et al., 1988) heterodimers. Occa- sionally, trace amount of CD3–FcR-chains, also disulfide- linked heterodimers, are detected (Samelson, 2002; Veillette et al., 2002). CD3-chain gene is known to have 8 exons, and CD3-chain is an alternatively spliced product composed of CD3-chain gene exons 1–7 with 3 end splicing to CD3 exon 8 located 3 down stream of CD3-chain exon 8. Although CD3-chain is not an absolute requirement for the T-cell development (Liu et al., 1997, 1993; Love et al., 1993; Shores et al., 1997a, 1994; Shores and Love, 1997), CD3-chain is critical for the selection of the TCR repertoire and for the prevention of autoimmunity (Lin et al., 1997; 0161-5890/$ – see front matter © 2005 Elsevier Ltd. All rights reserved. doi:10.1016/j.molimm.2005.01.008