Molecular Ecology Notes (2005) 5, 934–937 doi: 10.1111/j.1471-8286.2005.01121.x
© 2005 Blackwell Publishing Ltd
Blackwell Publishing, Ltd.
PRIMER NOTE
Characterization and evaluation of microsatellite loci in
European hazelnut (Corylus avellana L.) and their
transferability to other Corylus species
P. BOCCACCI,* A. AKKAK,* N. V. BASSIL,† S. A. MEHLENBACHER‡ and R. BOTTA*
* Dipartimento di Colture Arboree, Università di Torino, Via Leonardo da Vinci 44, 10095 Grugliasco (TO), Italy, † USDA-ARS
National Clonal Germplasm Repository, 33447 Peoria Rd., Corvallis, OR 97331 USA, ‡ Department of Horticulture, Oregon State
University, 4017 Agricultural and Life Sciences Bldg., Corvallis, OR 97331 USA
Abstract
In this work, 18 microsatellite loci were developed in the European hazelnut ( Corylus avellana
L.) using three enriched genomic libraries. They were evaluated on a set of 20 accessions
of this species on the basis of number of alleles (mean: 7.1), expected heterozygosity (mean:
0.67), power of discrimination (mean: 0.77) and polymorphism information content (mean:
0.64). Cross-species transferability was evaluated using seven other Corylus species. All
primer pairs amplified in all species, except for CaT-C505 in Corylus ferox and CaT-A114 in
Corylus californica.
Keywords: cross-species amplification, filbert, polymorphism, simple sequence repeats
Received 05 May 2005; revision accepted 22 June 2005
Corylus species are widely distributed throughout temperate
regions of the Northern Hemisphere from Japan, Korea,
China and the Russian Far East to the Caucasus, Turkey,
Europe and North America (Kasapligil 1972).
The European hazelnut ( Corylus avellana L.) is a commer-
cially important species. Cultivars in Europe and Turkey were
selected, over many centuries, from local wild populations.
In addition, several wild species have been crossed with
the economically important C. avellana in an effort to obtain
specific traits (Mehlenbacher 1991). Identification of hazelnut
cultivars is primarily based on analysis of nuts, husks and
other morphological traits. These, however, are often unre-
liable or imprecise indicators of plant genotype, being
influenced by environmental factors. Thus, discrimination
among closely related cultivars and clones is often extremely
difficult. Cultivar identification is especially difficult in a
nursery setting where plants are young and not yet bearing.
DNA typing can be a convenient method for accurately
identifying hazelnut cultivars. Microsatellite or simple
sequence repeat (SSR) molecular markers have been
routinely isolated from plants and have been very useful
because they are locus-specific, codominant, highly poly-
morphic and highly reproducible.
In this work, 18 microsatellite loci were developed in
C. avellana and their polymorphism was studied in a set
of 20 accessions of this species, coming from the various
countries that grow hazelnut (Table 1). Their cross-species
transferability was evaluated using representatives of seven
other Corylus species (Table 1): C. colurna L., C. californica
Marshall, C. ferox Wallich, C. heterophylla Fischer, C. papyracea
Hickel, C. chinensis Franchet and C. americana Marshall.
Furthermore, five individuals from the cross ‘Tonda Gen-
tile delle Langhe’ × ‘Cosford’ (Romisondo et al . 1983) and
the parent cultivars were analysed to check the segregation
of alleles at each locus.
Genetic Identification Services in Chatsworth, Cali-
fornia, USA constructed three genomic libraries enriched for
CA-, GA- and GAA-repeats, respectively, for Oregon State
University (OSU), Corvallis, Oregon, USA, using DNA
from dark-germinated seeds of a mixture of C. avellana cul-
tivars and selections. Later, DNA was cloned into pUC19
vector and used to transform Escherichia coli DH5 α follow-
ing the method of Edwards et al . (1996). DNA sequencing
was performed with a BigDye Terminator Cycle Sequencing
Ready Reaction kit version 2.0 using an ABI PRISM 377
sequencer (Applied Biosystems). All sequences obtained were
blasted against each other using the bioedit version 5.0.9
package (http://www.mbio.ncsu.edu/BioEdit/bioedit.html)
and duplicate sequences were removed. Primers were
Correspondence: R. Botta, Fax: +39-011-6708658; E-mail:
roberto.botta@unito.it