Contents lists available at ScienceDirect
Ecological Modelling
journal homepage: www.elsevier.com/locate/ecolmodel
Computational geometry applied to develop new metrics of road and edge
effects and their performance to understand the distribution of small
mammals in an Atlantic forest landscape
Simone R. Freitas
a,
⁎
, Everton Constantino
b
, Marcos M. Alexandrino
c
a
Universidade Federal do ABC, Santo André, SP, Brazil
b
Universidade Estadual de Campinas, Campinas, SP, Brazil
c
Department of Mathematics, Institute of Mathematics and Statistics, Universidade de São Paulo, São Paulo, SP, Brazil
ARTICLE INFO
Keywords:
Differential calculus
Edge effect
New software
Road ecology
Tropical forest
Wildlife
ABSTRACT
Roads negatively affect many vertebrate species, whereas edge effect may favor some generalist species. This
study aims to: 1) present a new way to calculate "line integral effects", represented by LIE and AVLIE, through
new computer software, making this concept accessible to a broad audience of researchers interested in the study
of Road Ecology and Tropical Forest Ecology; and, 2) test the performance of LIE and AVLIE indices, applied to
road effect (LIE_road and AVLIE_road) and to edge effect (LIE_edge and AVLIE_edge), other road effect indices
and forest area, using a data set on small mammal abundance in a human modified landscape in the Brazilian
Atlantic Forest. Road and edge effects were represented by new metrics: Line Integral Effect (LIE) and Average
Integral Effect (AVLIE), calculated using Line Integral from Differential Calculus of Several Variables through
new free software developed by the second author. LIE_road and LIE_edge measure the total sum of the effect of
roads (represented by lines) and edges (polygons), respectively, in relation to the forest fragment (point).
AVLIE_road and AVLIE_edge measure the average of road and edge effect, respectively, in relation to the same
sampling point. We used generalized linear regression models to explore the relationships between the abun-
dance of the two groups of small mammals (forest specialists and habitat generalists) and the independent
variables representing road, edge and forest effects. For forest specialists, the best model included AVLIE_road
(negatively associated with abundance) and AVLIE_edge (negatively associated), while for habitat generalists,
the best model included AVLIE_road (negatively associated) and LIE_edge (positively associated). Thus, there are
more small mammals where road effect is lower. Forest fragments with higher edge effect showed more habitat
generalists and less forest specialists. LIE and AVLIE could be useful metrics to explore edge effect separately to
road effect on wildlife in forest fragments.
1. Introduction
Line integral effect has been used in Freitas et al. (2012) and
Malcolm (1994) to study road effect (Laurance et al., 2009) and edge
effect (Murcia, 1995) respectively. It is defined as g (s,p)dl
c
where C is
a curve in
2
that can model a road or edge of region and g :
4
is
a function so that g (s,p) measures the effect of a point s C over a fixed
point p in the studied region. Roughly speaking p LIE( ) is approximated
by a sum of these effects multiplied by the length of parts of C .
The challenge in using a line integral effects index in a systematic
way is the issue of how to best integrate along so many curves that
appear to naturally model roads and edges. In Freitas et al. (2012),
these issues were approached through a simple numerical process that
would allow us to approximate the desired integral by a finite sum. This
numerical process (that has a controllable numerical error) requires
some work from the user. More precisely users must chose which curves
they want to integrate and which would make less sense from a biol-
ogist point of view. They also have to collect length of roads in different
discs (buffers) using GIS, making some calculations. All these steps in
the numerical process require some time of the user, and some under-
standing of the process itself and therefore the user could make mis-
takes and introduce errors during the calculations. It was clearly de-
sirable to have an automatic way to calculate this index with the least
work as possible, and demanding less mathematical knowledge from
the user than the previous procedure (Freitas et al., 2012).
https://doi.org/10.1016/j.ecolmodel.2018.08.004
Received 20 April 2018; Received in revised form 2 August 2018; Accepted 3 August 2018
⁎
Corresponding author at: Universidade Federal do ABC (UFABC), Avenida dos Estados, 5001, Bloco A, sala 631-3, 09210-580, Santo André, SP, Brazil.
E-mail address: simonerfreitas.ufabc@gmail.com (S.R. Freitas).
Ecological Modelling 388 (2018) 24–30
0304-3800/ © 2018 Elsevier B.V. All rights reserved.
T