Treasures from the Deep: Characellides as Anti-Inflammatory
Lipoglycotripeptides from the Sponge Characella pachastrelloides
Sam Afoullouss,
†,‡,∇
Kevin Calabro,
†,∇
Gre ́ gory Genta-Jouve,
§
Sandra Gegunde,
⊥
Amparo Alfonso,
⊥
Robert Nesbitt,
†
Christine Morrow,
‡,∥
Eva Alonso,
⊥
Luis M. Botana,*
,⊥
A. Louise Allcock,*
,‡
and Olivier P. Thomas*
,†
†
Marine Biodiscovery, School of Chemistry and Ryan Institute, National University of Ireland Galway (NUI Galway), University
Road, H91TK33 Galway, Ireland
‡
Zoology, School of Natural Sciences and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road,
H91TK33 Galway, Ireland
§
C-TAC, COMETE UMR 8638 CNRS, Université Paris Descartes, 4 avenue de l’observatoire, 75006 Paris, France
⊥
Departamento de Farmacología, Facultad de Veterinaria, Universidade de Santiago de Compostela, 27002 Lugo, Spain
∥
Department of Natural Sciences, National Museums Northern Ireland, 153 Bangor Road, Cultra BT18 0EU, Northern Ireland
* S Supporting Information
ABSTRACT: The chemical investigation of marine invertebrates from the deep Northeastern Atlantic revealed new
lipoglycotripeptides named characellides isolated from the tetractinellid sponge Characella pachastrelloides. This new family of
natural products features a central tripeptide linked to a rare sugar unit and a long alkyl chain ending with a 2,3-
dimethyltetrahydropyran. The configurations of all 13 chiral centers were determined by extensive use of NMR data and circular
dichroism spectra combined with calculations.
A
mong the new horizons for marine biodiscovery, the
deep ocean has recently attracted much attention.
Technological advances exemplified by the development of
underwater remote operated vehicles (ROVs) have enabled in
situ photography and careful collection of specimens from
depths that were previously inaccessible, except by dredging.
In recent years, natural product chemists have been turning to
the deep sea where the physio-chemical conditions are
extreme in comparison with other ecosystems with the aim
of discovering new chemical structures.
1
A rapid review of the
literature on deep-sea natural products reveals a particular
focus on microorganisms like bacteria and fungi that have
already led to new chemical architectures.
2
However, chemical
studies on marine invertebrates are still scarce, mainly because
of the difficulties in collection and identification of the
samples, compounded by the scarcity of taxonomists, and the
high percentage of novel species. Several worldwide programs
have recently been funded to fill the gaps in our knowledge of
the marine biodiversity present below 500 m.
We undertook the first chemical screening of sponges
collected from deep water off the southwest coast of Ireland.
In order to make best use of the samples and within the
context of sustainable exploitation, we did not choose a
bioguided approach, but rather we aimed at a broad
description of the metabolome of each collected specimen.
A UPLC-DAD-MS/MS chemical screening prioritized the
marine sponge Characella pachastrelloides
3
as a rich source of
chemical diversity. Molecular networking showed a high level
of novelty among the different clusters present. Interestingly, a
large diversity of poecillastrins recently identified in a species
of this genus were uncovered.
4
Nevertheless, the presence of
other clusters of major metabolites with high molecular
Received: November 18, 2018
Published: December 20, 2018
Letter
pubs.acs.org/OrgLett
Cite This: Org. Lett. 2019, 21, 246-251
© 2018 American Chemical Society 246 DOI: 10.1021/acs.orglett.8b03684
Org. Lett. 2019, 21, 246−251
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