Six- to Five-Coordinate Heme-Nitrosyl Conversion in Cytochrome c′ and Its
Relevance to Guanylate Cyclase
†
Colin R. Andrew,*
,‡,§
Simon J. George,
|
David M. Lawson,
|
and Robert R. Eady
|
Department of Chemistry, Eastern Oregon UniVersity, One UniVersity BouleVard, La Grande, Oregon 97850-2899, Department
of Biochemistry and Molecular Biology, Oregon Graduate Institute of Science and Technology, 20000 NW Walker Road,
BeaVerton, Oregon 97006-8921, and Department of Biological Chemistry, John Innes Centre, Norwich NR4 7UH, U.K.
ReceiVed July 9, 2001
ABSTRACT: The 5-coordinate ferrous heme of Alcaligenes xylosoxidans cytochrome c′ reacts with NO to
form a 6-coordinate nitrosyl intermediate (λ
Soret
at 415 nm) which subsequently converts to a 5-coordinate
nitrosyl end product (λ
Soret
at 395 nm) in a rate-determining step. Stopped-flow measurements at pH 8.9,
25 °C, yield a rate constant for the formation of the 6-coordinate nitrosyl adduct, k
on
) (4.4 ( 0.5) × 10
4
M
-1
s
-1
, which is 3-4 orders of magnitude lower than the values for other pentacoordinate ferrous hemes
and is consistent with NO binding within the sterically crowded distal heme pocket. Resonance Raman
measurements of the freeze-trapped 6-coordinate nitrosyl intermediate reveal an unusually high Fe-NO
stretching frequency of 579 cm
-1
, suggesting a distorted Fe-N-O coordination geometry. The rate of 6-
to 5-coordinate heme nitrosyl conversion is also dependent upon NO concentration, with a rate constant,
k
6-5
) (8.1 ( 0.7) × 10
3
M
-1
s
-1
, implying that an additional molecule of NO is required to form the
5c-NO adduct. Since crystallographic studies have shown that the 5-coordinate nitrosyl complex of
cytochrome c′ binds NO to the proximal (rather than distal) face of the heme, the NO dependence of the
6- to 5-coordinate NO conversion supports a mechanism in which the weakened His ligand, as well as
the distally bound NO, is displaced by a second NO molecule which attacks and is retained in the proximal
coordination position. The fact that a dependent 6- to 5-coordinate nitrosyl conversion has been previously
reported for soluble guanylate cyclase suggests that the mechanism of Fe-His bond cleavage may be
similar to that of cytochrome c′ and strengthens the recent proposal that both proteins exhibit proximal
NO binding in their 5-coordinate nitrosyl adducts.
Nitric oxide (NO)
1
is implicated as a signaling molecule
in a wide range of organisms including animals, plants, and
micoorganisms (1-7). The best characterized system is that
of animals, in which cell-cell signaling occurs through the
interaction of micromolar NO levels with the heme-contain-
ing enzyme, soluble guanylate cyclase (sGC) (8). Binding
of NO to the heme center of sGC triggers the conversion of
GTP to the second-messenger cGMP, which in turn regulates
a host of physiological processes such as smooth muscle
contraction, blood clotting, and neurotransmission (2, 8).
Formation of a 5c-NO heme complex in sGC and the
associated Fe-His bond cleavage are believed to be the
trigger which activates the production of cGMP (8, 9).
Deducing the mechanism of 5c-NO adduct formation in sGC
is, therefore, of particular biomedical interest.
Cytochrome c′ (cyt c′) is a hemoprotein found in the
periplasm of certain proteobacteria which contains a penta-
coordinate heme center located toward the C-terminus of a
four R-helix bundle (10, 11). Although the exact physiologi-
cal role of cyt c′ is unclear, several studies have suggested
that NO binding to the heme may help bacteria suppress
potentially toxic levels of free NO in their environment (12-
16). In particular, Moir and co-workers have shown that a
cyt c′-deficient mutant of the photosynthetic bacterium
Rhodobacter capsulatus exhibited increased sensitivity to
nitrosative stress (16). Intriguingly, the same group recently
reported in vivo studies suggesting that R. capsulatus cyt c′
might in fact function as an NO reductase (17).
Additional interest in the coordination chemistry of cyt c′
stems from similarities with sGC, including the ability to
form a 5c-NO heme adduct (18). Moreover, recent crystal-
lographic characterization of cyt c′ from Alcalignes xylosoxi-
dans (AXCP) has yielded the exciting discovery that
exogenous ligands are able to bind to the Fe from either side
of the heme face. Whereas the 6c-CO complex of AXCP
contains CO bound to Fe at the distal position, the 5c-NO
adduct exhibits a novel proximal coordination geometry with
NO residing at the site originally occupied by the His ligand
(19). In the case of sGC, the currently accepted model for
†
This work was supported by NIH Grant GM 34468 to Professor
Thomas M. Loehr. D.M.L., S.J.G., and R.R.E. are funded by the
BBSRC as part of the competitive strategic grant to the John Innes
Centre.
* To whom correspondence should be addressed. Fax: (541) 962-
3873. E-mail: candrew@eou.edu.
‡
Present address: Eastern Oregon Univeristy.
§
Oregon Graduate Institute of Science and Technology.
|
John Innes Centre.
1
Abbreviations: NO, nitric oxide; CO, carbon monoxide; 5c and
6c, 5-coordinate and 6-coordinate, respectively; cyt c′, cytochrome c′;
AXCP, Alcaligenes xylosoxidans cyt c′; cyt c, mitochondrial cytochrome
c; sGC, soluble guanylate cyclase; Mb, myoglobin; Hb, hemoglobin;
CCP, cytochrome c peroxidase; CooA, CO oxidation activator; PGHS-
1, prostaglandin endoperoxide H synthase-1; NOS, nitric oxide synthase;
P450, cytochrome P450; CPO, chloroperoxidase.
2353 Biochemistry 2002, 41, 2353-2360
10.1021/bi011419k CCC: $22.00 © 2002 American Chemical Society
Published on Web 01/25/2002