Carbohydrate Reaction Intermediates: Effect of Ring-Oxygen
Protonation on the Structure and Conformation of
Aldofuranosyl Rings
Jamie Kennedy,
†
Jian Wu,
‡
Kenneth Drew,
†
Ian Carmichael,
§
and
Anthony S. Serianni*
,†
Contribution from the Department of Chemistry and Biochemistry, UniVersity of Notre Dame,
Notre Dame, Indiana 46556, Department of Human Biological Chemistry and Genetics,
UniVersity of Texas Medical Branch, GalVeston, Texas 77555-1157, and Radiation Laboratory,
UniVersity of Notre Dame, Notre Dame, Indiana 46556
ReceiVed October 28, 1996. ReVised Manuscript ReceiVed June 11, 1997
X
Abstract: The effect of ring-oxygen protonation on the structure and conformational properties of a model
deoxyaldofuranose, 2-deoxy--D-glycero-tetrofuranose 2, has been examined with the use of NMR spectroscopy
and ab initio molecular orbital calculations conducted at the HF/6-31G* level of theory. The computational method
was validated by comparing the conformational behavior of 2 derived from PSEUROT treatment of
3
J
HH
values
measured in 2 (
2
H
2
O solvent) with that predicted from the theoretical calculations. Coupling data indicate that 2
favors S forms in solution (∼89%
4
T
3
, ∼11% E
2
), while MO data indicated more comparable populations of the
same or very similar N and S forms. Protonation of 2 at the ring oxygen (O4), yielding 1, gave two distinct protonated
forms which differed in the orientation of the proton about O4. Both forms showed substantial changes in ring
structure and conformation compared to 2. Protonated forms almost exclusively prefer S forms (E
3
), and energy
barriers for N/S interconversion were found to be considerably higher than those for 2, leading to the conclusion that
1 is more conformationally constrained than 2. Bond lengths in the vicinity of O4 changed significantly upon
conversion of 2 to 1; for example, the C1-O4 bond length increases by ∼14%, the C1-H1 and C1-O1 bond
lengths decrease by 1-5%, and the C4-O4 bond length increases by ∼5%. These results indicate that O4 protonation
predisposes 2 toward ring opening by inducing specific structural and conformational modifications, thus providing
a more concise explanation of the role of acid catalysis in furanose anomerization (i.e., 1 resembles the transition
state of the acid-catalyzed anomerization reaction more than 2). The molecular orbital data obtained in this investigation
also provide evidence for a new structural factor (a 1,3-effect involving oxygen lone-pair orbitals) that influences
bond lengths in carbohydrates.
Introduction
Furanosyl rings are common scaffolds upon which many
biologically-important compounds, both simple and complex,
are constructed. For example, cell metabolites such as D-
fructose 1,6-bisphosphate and D-ribose 5-phosphate contain a
single furanose ring, whereas biopolymers such as nucleic acids
and some polysaccharides (e.g., inulin) are comprised of many
furanose building blocks. In contrast to most pyranosyl rings,
1
furanosyl rings are not conformationally homogeneous in solu-
tion, but exist in various nonplanar envelope and twist conform-
ers that are similar in energy (energy barriers < ∼4 kcal/mol).
2
The spontaneous interconversion between these forms in solution
proceeds via a pseudorotational itinerary
2a
(Figure 1) in which
nonplanar forms (E, envelope; T, twist) interconvert with other
nonplanar forms, that is, the less stable planar form is not
involved as an intermediate. An alternative, and presumably
less preferred, mode of conformer exchange (i.e., inversion)
describes conformer interconversion via the planar form.
2c
The fluxional behavior of furanosyl rings confers considerable
flexibility to molecules that contain them, and this flexibility
may have important implications for biological recognition. For
example, given the relative ease of interconversion of nonplanar
furanose conformers, it is energetically possible that confor-
mational change may occur in substrates containing a furanose
constituent upon initial binding by enzymes. In contrast,
conformational change is less likely for most pyranosyl rings,
at least for
4
C
1
and
1
C
4
interconversion, where the energy barrier
for interconversion is considerably greater.
2e
Likewise, chem-
istry performed on a furanose ring during an enzyme-catalyzed
reaction might be accompanied by significant change in ring
shape, again facilitated by the low barriers for conformer
interconversion. These changes, if they occur, might represent
an important element in the underlying molecular processes
affecting catalytic efficiency. Indeed, such structural and/or
conformational changes have been implicated in transition state
analyses of enzyme reactions involving oxycarbonium ion
intermediates derived from furanose-containing substrates.
3
* Address correspondence to this author.
†
Department of Chemistry and Biochemistry, University of Notre Dame.
‡
Department of Human Biological Chemistry and Genetics, University
of Texas Medical Branch.
§
Radiation Laboratory, University of Notre Dame.
X
Abstract published in AdVance ACS Abstracts, August 1, 1997.
(1) Many aldopyranosyl rings, such as those having the gluco, manno,
and galacto configurations, are considered highly conformationally con-
strained to a single chair form (e.g.,
4
C1 for D-gluco). In contrast, a few
rings, such as those having the ribo, ido, and altro configurations, exhibit
considerable conformational mobility.
(2) (a) Altona, C.; Sundaralingam, M. J. Am. Chem. Soc. 1972, 94, 8205-
8212. (b) Harvey, S. C.; Prabhakaran, M. J. Am. Chem. Soc. 1986, 108,
6128-6136. (c) Westhof, E.; Sundaralingam, M. J. Am. Chem. Soc. 1983,
105, 970-976. (d) Levitt, M.; Warshel, A. J. Am. Chem. Soc. 1978, 100,
2607-2613. (e) The free energy barrier for chair interconversion of
cyclohexane has been estimated at ∼10 kcal/mol (Jensen, F. R.; Noyce, D.
S.; Sederholm, C. H.; Berlin, A. J. J. Am. Chem. Soc. 1962, 84, 386); barriers
for aldopyranose chair interconversion are expected to be considerably
higher (Dowd, M. K.; French, A. D.; Reilly, P. J. Carbohydr. Res. 1994,
264,1-19).
8933 J. Am. Chem. Soc. 1997, 119, 8933-8945
S0002-7863(96)03727-4 CCC: $14.00 © 1997 American Chemical Society