ISSN 00360244, Russian Journal of Physical Chemistry A, 2010, Vol. 84, No. 12, pp. 2077–2081. © Pleiades Publishing, Ltd., 2010.
Original Russian Text © D.V. Ivlev, A.A. Dyshin, M.G. Kiselev, A.M. Kolker, 2010, published in Zhurnal Fizicheskoi Khimii, 2010, Vol. 84, No. 12, pp. 2271–2275.
2077
INTRODUCTION
The number of works devoted to investigating alco
hols over a wide range of state parameters from vitre
ous [1–3] to supercritical [4–6] has substantially
increased as of late. Aliphatic alcohols are a classic
example of heterofunctional molecules with a polar
group on the one hand, and a hydrophobic part on the
other hand. The structure and dynamic characteristics
of alcohols have been studied using both experimental
(Xray diffraction, NMR, IR and Raman spectros
copy, neutron diffraction, dielectric relaxation) [4–
16] and computer simulation methods [10, 17–24]. In
[25], the spinlattice relaxation times and chemical
shifts for hydroxyl protons in methanol were measured
over a wide range of state parameters. The average
number of hydrogen bonds and the dependence of
chemical shifts on pressure and temperature were
obtained. Hoffman and Conradi [13] studied the for
mation of the hydrogen bond in supercritical metha
nol and ethanol. The authors of [26] used molecular
dynamics (MD) to study the formation of the hydro
gen bond in supercritical and liquid methanol over
wide ranges of state parameters.
In [24], an MD investigation of the dynamics of
supercritical and liquid ethanol was presented over a
wide range of temperature, from normal to 723 K, and
pressures of up to 30 MPa. The authors concluded
there were chain structures in the supercritical state.
Similar results were obtained for supercritical
tertbuthanol [14] by IR spectroscopy and MD simu
lation.
STRUCTURE OF MATTER
AND QUANTUM CHEMISTRY
Topology of HydrogenBonded Clusters in Sub and Supercritical
nButhanol. Molecular Dynamics Simulation
D. V. Ivlev, A. A. Dyshin, M. G. Kiselev, and A. M. Kolker
Institute of Solution Chemistry, Russian Academy of Sciences, Ivanovo, 153045 Russia
email: mgk@iscras.ru
Received November 26, 2009
Abstract—We present the study of hydrogenbonded clusters in sub and supercritical nbuthanol by molec
ular dynamics. A number of characteristics of hydrogen bonds were calculated on the basis of a geometrical
criterion. It was determined that the effect of the partial reduction of the structure of condensed medium near
critical point is manifested in an increase in the average number of hydrogen bonds and the first peak of the
hydrogen–oxygen radial distribution function. By investigating the topology of hydrogenbonded clusters, it
was shown that this reduction is determined by an increase of the fraction of molecules bound by two hydro
gen bonds, and a reduction in the fraction of unbonded ones.
DOI: 10.1134/S0036024410120125
Table 1. Charges on atoms of buthanol molecule
Types of atoms q, e Types of atoms q, e
c3 –0.0942 hc 0.0673
hc 0.0336 hc 0.0436
hc 0.0332 c3 0.1321
hc 0.0303 h1 0.0183
c3 –0.0797 h1 0.0223
hc 0.0447 oh –0.6047
hc 0.0405 ho 0.3969
c3 –0.0842
Note: hc are hydrogen atoms of the CH
3
group, c3 are carbon
atoms, and oh are oxygen atoms; h1 are hydrogen atoms of
the hydroxyl group.
Table 2. Parameters of intermolecular interaction
I II ε, kJ/mol σ, Å
c3 c3 1.09 3.399670
c3 hc 0.41 3.024601
c3 h1 0.41 2.935511
c3 oh 1.52 3.233071
hc hc 0.16 2.649533
hc h1 0.16 2.560443
hc oh 0.57 2.858003
h1 h1 0.16 2.471353
h1 oh 0.57 2.768913
oh oh 2.10 3.066473
Note: I and II are the types of atoms in the first and second buthanol
molecule.