SUPPORTING INFORMATION DAPPLE 2: a tool for the homology-based prediction of post-translational modification sites Brett Trost *,, , Farhad Maleki , Anthony Kusalik , and Scott Napper , Vaccine and Infectious Disease Organization, University of Saskatchewan, Saskatoon, SK, Canada Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada Department of Biochemistry, University of Saskatchewan, Saskatoon, SK, Canada * Corresponding author: Brett Trost (e-mail: brett.trost@usask.ca; phone: +1-306-966-1495) Table of contents Item Page Table S1 S2 Table S2 S2 Table S3 S3 Table S4 S3 Table S5 S4 Table S6 S4 Table S7 S5 Table S8 S6 S1