Original Article
International Journal of Fuzzy Logic and Intelligent Systems
Vol. 17, No. 4, December 2017, pp. 307-314
http://dx.doi.org/10.5391/IJFIS.2017.17.4.307
ISSN(Print) 1598-2645
ISSN(Online) 2093-744X
Self-evolving Disease Ontology for Medical
Domain Based on Web
Ishara Sandun, Sagara Sumathipala, and Gamage Upeksha Ganegoda
Faculty of Information Technology, University of Moratuwa, Katubedda, Moratuwa, Sri Lanka
Abstract
In last decade information technology has gained a rapid development, and today it plays a
crucial role in everyone’s life. It makes the life more comfortable for professional to do their
work. Every performance and the innovating task will become more comfortable if there is a
proper and accurate knowledge base containing up to date information. It will be an added
advantage if the so-called knowledge base could shrink and expand dynamically. Especially
in the medical domain, there is a higher demand and necessity for such kind of knowledge
base which evolves dynamically with time and data because medical field is rapidly evolving
and new biomedical entities such as diseases, symptoms, proteins, and so forth are frequently
introducing. This study proposes a mechanism to generate dynamically evolving ontology for
the biomedical domain which evolves with new relations explores from web data and patient
history records. Proposed approach retrieves information from the ontology and generates
probabilistic values for each relationship in the disease ontology. This approach used to create
a dynamically evolving ontology for the medical domain to manage the relationship between
diseases and symptoms more effectively. Furthermore, it retrieves data from the ontology to
answer user queries related to the diseases and symptoms.
Keywords: Medical ontology, Biomedical relationship extraction, Named entity recognition,
Text mining
Received: Dec. 11, 2017
Revised : Dec. 18, 2017
Accepted: Dec. 20, 2016
Correspondence to: Sagara Sumathipala
(sagaras@uom.lk)
©The Korean Institute of Intelligent Systems
cc This is an Open Access article dis-
tributed under the terms of the Creative
Commons Attribution Non-Commercial Li-
cense (http://creativecommons.org/licenses/
by-nc/3.0/) which permits unrestricted non-
commercial use, distribution, and reproduc-
tion in any medium, provided the original
work is properly cited.
1. Introduction
There is a famous proverb saying that “Health is Wealth.” Health and well-being are two key
factors to live a happy life. They are essential since it affects directly to one’s life and to live
happily. In last decade information technology has gained a rapid development, and today it
plays a crucial role in everyone’s life. It makes the life more comfortable for professional to do
their work. With the development of technology, people have come up with new methods and
inventions to make the life easy for the professionals. Every performance and the innovating
task will become more comfortable if there is a proper and accurate knowledge base containing
up to date information. It will be an added advantage if the so-called knowledge base could
shrink and expand dynamically. Especially in the medical domain, there is a higher demand
and necessity for such kind of knowledge base which evolves dynamically with time and
data. In medical domain new diseases, viruses, genes, etc. are identified very often, and
relationships among them are rapidly changing.
If the new biomedical relationships are not identified accurately and adequately, it will take
a longer duration to identify a disease, its causes, methods to cure, and prevention. Therefore,
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