Fluid Phase Equilibria 312 (2011) 37–59
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Fluid Phase Equilibria
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Changes induced by solvent polarity in electronic absorption spectra of some
nucleic acid constituents
Mamdouh S. Masoud
∗
, Ahmed M. Hindawy, Amina A. Soayed, Marwa Y. Abd El-Kaway
1
Chemistry Department, Faculty of Science, Alexandria University, Alexandria, Egypt
a r t i c l e i n f o
Article history:
Received 28 October 2010
Received in revised form 28 August 2011
Accepted 30 August 2011
Available online 17 September 2011
Keywords:
Nucleic acid constituents
Electronic absorption spectra
Solvent effects
Solvent parameters
a b s t r a c t
The electronic absorption spectra of some biologically active nucleic acid constituents in various
solvents of different polarities and with variable physical properties have been studied at room tem-
perature. These compounds are of two categories (pyrimidines: [barbital; 5,5
′
-diethyl-barbituric acid],
[SBA; 4,6-dihydroxy-2-mercapto-pyrimidin], [NBA; 5-nitro-2,4,6(1H,3H,5H)-pyrimidine trione] and [TU;
2,3-dihydro-2-thioxo-pyrimidin-4(1H)-one]) and (purines: [adenine; 6-amino purine] and [guanine; 2-
amino-6-hydroxy purine]). The solvent effects on the wavenumbers of the absorption band maxima
(
’
max
) were discussed using the following solvent parameters: refractive index (n), dielectric constant (D)
and empirical Kamlet–Taft solvent parameters, * (dipolarity/polarizability), ˛ (hydrogen bond donating
capacity) and ˇ (hydrogen bond accepting ability) using multiple linear regression method (MLR). The
solute–solvent interactions were determined on the basis of multilinear solvation energy relationships
concept. The data of the studied molecules are affected by both non-specific and specific solute–solvent
interactions. The solvatochromic behavior was explained.
© 2011 Elsevier B.V. All rights reserved.
1. Introduction
Nucleic acid compounds either pyrimidines or purines have
much attention due to the widespread range of biological appli-
cations in pharmaceutical field. Thiopyrimidine derivatives exhibit
antiviral and chemotherapeutic activity [1]. These are physiolog-
ically important essential for the biosynthesis of proteins [2,3].
They possess a very important chemical role in industrial appli-
cations where these classes of organic compounds are widely
used in recent years as corrosion inhibitors for metals in acid
environments [4]. In our laboratory, Masoud et al. [5–14] pub-
lished a series of papers to throw light on the chemistry of the
biologically active purine and pyrimidines, beside the effect of
solvents on their electronic absorption spectra [15–18]. This can
be influenced by non-specific interactions such as ion-dipole,
dipole–dipole (Keesom interaction), induced dipole–permanent
∗
Corresponding author.
E-mail addresses: drmsmasoud@yahoo.com (M.S. Masoud),
chemarwa@yahoo.com (M.Y.A. El-Kaway).
URL: http://www.geocities.ws/drmsmasoud (M.S. Masoud).
1
Abstracted from her Ph.D.thesis.
dipole interactions (Debye interaction) or by specific interaction
such as hydrogen bonding with solvents. Thus, solvents play an
important role in physical and chemical processes and can deter-
mine change in the position, intensity and shape of absorption
bands [19,20]. Solvatochromism is a powerful tool to investi-
gate the physical–chemical properties of molecules [21]. It is well
known that the effects of solvents on physical–chemical phe-
nomena and spectroscopic data are better analyzed in terms of a
linear combination of solvent properties, including solvent dipo-
larity/polarizability (*), hydrogen-bond donation ability [solvent
acidity] (˛) and hydrogen-bond acceptance ability [solvent basic-
ity] (ˇ).
The aim of the present work is to investigate the solvent influ-
ence on the UV–Vis absorption spectra of some pyrimidines and
purines and to evaluate the information about intermolecular inter-
actions occurring in solutions. The spectral characteristics of the
studied ligands in different solvents at room temperature were
analyzed by SPSS programmed. A linear correlation between exper-
imental spectral values (
’
max
) and the solvent parameters: f (n
2
)
and f (D), or the solvatochromic empirical variables (*, ˛ and ˇ)
have been used to discuss the solvatochromic behavior of the ana-
lyzed ligands to evaluate their contributions to the solute–solvent
interactions.
0378-3812/$ – see front matter © 2011 Elsevier B.V. All rights reserved.
doi:10.1016/j.fluid.2011.08.028