Synthesis of Thiamacrocycles and Conformational Studies on
Their Precursors
Rudolph A. Abramovitch,* Xiaocong Ye, William T. Pennington, George Schimek, and
Dariuz Bogdal
Department of Chemistry, Clemson University, Clemson, South Carolina 29634-0973
Received July 16, 1999
1-(4-Nitrophenyl)-7-phenylthioheptane (1) and -9-phenylthiononane (2) have been synthesized and
their conformations studied in solution and in the solid state. MMX calculations suggest that the
global energy minimum structures are bent in the gas phase, probably owing to edge-to-face
intramolecular attractive interaction between the electron rich and the electron poor terminal aryl
groups. These conformations were confirmed in solution using 2D NOESY NMR. In the solid state,
1 and 2 exist in the staggered, linear conformation, stacked head-to-tail, with the plane of the
nitro group being tilted above the plane of the benzene ring. It appears that the crystal lattice
forces overcome the weak edge-to-face intramolecular aromatic interactions that dominate in the
gas phase and in solution. The corresponding azides were treated with trifluoromethanesulfonic
acid to generate the nitrenium ions, which underwent intramolecular ring-closure to give the
corresponding 17- and 19-membered ring thiamacrocycles in modest yields. These results support
the suggestion that MMX calculations on appropriate model compounds may be useful in predicting
which precursors will lead to macrocycles and which will not.
Introduction
The synthesis of macrocyclic compounds has attracted
extensive attention from synthetic chemists owing to the
existence of a number of macrocyclic natural products
that exhibit useful biological activities, e.g., vancomycin,
1a
RA-VII,
1b
arnabinol,
1c
combretastatin D-2,
1d
myricanone,
1e
sinuloriolide,
1f
to name but a few. Many effective methods
have been developed during the past 20 years, especially
for macrolide synthesis. Some involve high-dilution tech-
niques to enhance intramolecular interaction. There was
also some consideration of the effect of the conformation
of the precursor in the process leading to macrocycle
formation. For example, in the synthesis of macrolides,
2-4
intermediates were formed that brought the reacting
sites close together, thus favoring lactonization. More
recently, Marshall and co-workers
5
have synthesized a
series of 12-16-membered propargylic alcohols in good
yields through Lewis acid promoted electrophilic ring
closure. Post facto molecular modeling calculations (MMX)
on the corresponding formyl-O-protonated precursor
6a
showed that the global MMXE minimum is the bent
structure in which the reacting alkene site is right under
the CdOH
+
group. Roussi, Beugelmans, and co-workers
7
formed a 15-membered ring biaryl ether intramolecularly
in very good yield and attributed this to a favorable
conformation of the cyclization precursor, indicated by
molecular modeling to have the two interacting sites
within 4.86 A of each other, resulting in a low activation
energy (-187.5 kJ/mol) and a favorable entropy for
cyclization.
In 1989 we reported the formation (in 30% isolated
yield) of a 16-membered ring involving intramolecular
aromatic amination by an arylnitrenium ion under
normal solution concentration (40 mM) conditions).
8
It
was suggested that, in a long flexible chain bearing
electron-acceptor and electron-donor end groups, these
groups could “recognize” each other and get close enough
such that, if this resulted in a lower activation energy
for intramolecular cyclization compared with other pos-
sible intermolecular pathways (thus satisfying the Cur-
tin-Hammett hypothesis), intramolecular cyclization would
take place.
That this novel idea was plausible was first tested by
computing the docking of benzene and nitrobenzene in
several different approaches.
9
The two lowest energy
orientations (nitrobenzene approaching benzene, and
benzene approaching nitrobenzene) from MM were car-
ried into MOPAC and minimized. The distance of nearest
approach between a hydrogen of one molecule and a
carbon of another was 2.8 Å. Nitrobenzene approaching
benzene (the plane of the C
6
H
5
NO
2
is above, and orthogo-
nal to that of benzene) had a computed MOPAC energy
of 153.7 kJ/mol. The reverse approach (plane of C
6
H
6
above, and orthogonal to the plane of C
6
H
5
NO
2
) had an
energy of 157.9 kJ/mol. This suggested that edge-to-face
aromatic interaction may account for the proposed mo-
lecular recognition.
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10.1021/jo991139z CCC: $19.00 © 2000 American Chemical Society
Published on Web 12/29/1999