Evaluating the Role of Chromophore Side Group Identity in Mediating Solution-Phase
Rotational Motion
Kelly P. Greenough and G. J. Blanchard*
Michigan State UniVersity, Department of Chemistry, East Lansing, Michigan 48824-1322
ReceiVed: August 22, 2006; In Final Form: NoVember 4, 2006
We report on the rotational diffusion dynamics of the chromophore 7-nitrobenz-2-oxa-1,3-diazole (NBD) in
a series of protic and polar aprotic solvents, as a function of the identity of the side group appended to the
chromophore amine functionality. The central issue we address is whether or not the side groups play a role
in mediating the anisotropic reorientation dynamics of the chromophore. To understand the motional properties
of the chromophores in detail, we use both one-photon and two-photon excited fluorescence anisotropy decay
measurements, and from these complementary excitation methods, we extract two of the Cartesian components
of the rotational diffusion constant, D. The experimental data indicate that, regardless of the functionality of
the pendant side group, the reorienting moieties exhibit ratios of D
z
/D
x
in the range 1.8-2.0. There is a small
but discernible difference between the substituted chromophores. For all of the substituted NBD chromophores,
dielectric friction plays a discernible role in determining their reorientation dynamics.
Introduction
The motion of a molecule in solution is controlled by a
number of factors, ranging from its size, shape, and polarity to
the nature of its interactions with its immediate environment.
It is these interactions that play a critical role in mediating
processes such as chemical reaction kinetics, for example. As
a result of a broad effort over the past decade or more, a series
of chromophores has been identified that are capable of
providing information on their local environment with both their
time- and frequency-domain responses. Molecules such as
pyrene are known to exhibit solvent polarity-dependent fluo-
rescence spectral profiles, and the fluorescence lifetime of this
molecule depends sensitively on the amount of oxygen present.
1
Other chromophores have been developed that are tethered to
specific structures, allowing them to locate in comparatively
well-defined regions of heterogeneous systems. The so-called
lock-and-key approach to the examination of crystallization
phenomena makes use of chromophores that have as pendant
side groups the crystallizing entity.
2-4
This approach to the
optical interrogation of molecular-scale phenomena has proven
to be useful to a broad range of biological and chemical
investigations.
One chromophore that has been used widely for the study of
biological and biomimetic systems is 7-nitrobenz-2-oxa-1,3-
diazole, NBD.
5-12
The reason for the popularity of this
chromophore is that its fluorescence spectral profile and lifetime
both depend sensitively on the polarity of its immediate
environment. In addition, the chromophore NBD is amenable
to synthetic substitution or modification of its amine side group,
rendering it useful for localization within heterogeneous systems.
A variety of sterols, lipids, and other compounds are available
with a pendant NBD chromophore. A recurring question in these
studies is the role that the chromophore side group plays in
mediating its dynamics. In an effort to address this issue, we
have undertaken a study of the reorientation and fluorescence
lifetime of NBD possessing several different side groups in a
series of polar protic and aprotic solvents. Our data indicate
that the reorientation dynamics of the NBD chromophore depend
on the identity of the chromophore side group to a limited extent
and that we can account for the experimental data in the context
of a combination of frictional and dielectric interactions between
the dipolar chromophore and its immediate environment.
Experimental Section
Materials. The fluorescent probes (Chart 1) succinimidyl
6-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino) hexanoate (SNBD)
and 6-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino hexanoic
acid (NBDHA) were obtained from Molecular Probes, Inc., and
used without further purification. The probe 4-benzylamino-7-
nitrobenzofurazan (BBD) was purchased from Sigma-Aldrich
and was also used as received. The solvents methanol, 1-pro-
panol, 1-butanol, 1-pentanol, dimethyl sulfoxide (DMSO), N,N-
dimethylformamide (DMF), and acetonitrile (ACN) were pur-
chased from Sigma-Aldrich in their highest purity available and
* Author to whom correspondence should be addressed. Email:
blanchard@chemistry.msu.edu.
CHART 1: Structures of the Substituted NBD
Chromophores Used in This Work
558 J. Phys. Chem. A 2007, 111, 558-566
10.1021/jp065423n CCC: $37.00 © 2007 American Chemical Society
Published on Web 12/21/2006