Minireview
doi.org/10.1002/ejoc.202000356
EurJOC
European Journal of Organic Chemistry
Supramolecular Catalysis | Very Important Paper |
Hydrolytic Nanozymes
Luca Gabrielli,
[a]
Leonard J. Prins,
[a]
Federico Rastrelli,
[a]
Fabrizio Mancin,
[a]
and Paolo Scrimin*
[a]
In memory of Umberto Tonellato, the scientific father of our group
Abstract: In 2004 we first reported catalytic nanoparticles, that
are able to cleave phosphate diesters with very high efficiency
(Angew. Chem. Int Ed, 2004, 43, 6165–6169) and dubbed them
“nanozymes” for the similarity of their behavior with natural
enzymes, both in terms of efficiency and mechanism of action.
Since then the field has impressively expanded and a search on
the web of science at the time of submitting this contribution
returned almost 1,000 entries. This minireview highlights what
has been done in the field focusing specifically on hydrolytic
nanozymes, the focal point of the research in our group since
1. Introduction
Nanozymes are nanoscale systems endowed with the property
of catalyzing a chemical reaction by interacting with the sub-
strate they transform via a pre-transformation complexation
process.
[1–5]
The reactions follow, hence, the same steps of an
enzyme-catalyzed transformation: the equilibrium towards the
enzyme/substrate complex (ES) followed by its evolution into
products with the final release of the enzyme. The analogy with
enzymes is also supported by the dimensions of these systems
(typically 2–50 nm), not much different from those of a catalytic
protein. As an example, the diameter of trypsin is ca. 5 nm.
Most of these nanosystems, are intrinsically multivalent, since
they feature a collection of identical (or similar) functionali-
ties.
[6,7]
These functional groups may be held together by weak
interactions or by covalent bonds. Examples of the first are mi-
cellar or vesicular aggregates while examples of the second are
functional polymers, dendrimers or monolayer-protected nano-
particles. Multivalency is particularly important in binding. Nu-
merous reports show these systems interact very strongly with
[a] Dr. L. Gabrielli, Dr. Prof. L. J. Prins, Dr. Prof. F. Rastrelli, Dr. Prof. F. Mancin,
Dr. Prof. P. Scrimin
Department of Chemical Sciences, University of Padova, via Marzolo, 1,
35131 Padova, Italy
E-mail: paolo.scrimin@unipd.it
luca.gabrielli@unipd.it
leonard.prins@unipd.it
federico.rastrelli@unipd.it
fabrizio.mancin@unipd.it
http://wwwdisc.chimica.unipd.it/paolo.scrimin/pubblica/
http://wwwdisc.chimica.unipd.it/leonard.prins/pubblica/
http://wwwdisc.chimica.unipd.it/federico.rastrelli/pubblica/
http://wwwdisc.chimica.unipd.it/fabrizio.mancin/pubblica/index.htm
ORCID(s) from the author(s) for this article is/are available on the WWW
under https://doi.org/10.1002/ejoc.202000356.
Eur. J. Org. Chem. 2020, 5044–5055 © 2020 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim 5044
its very beginning. Special emphasis is given to the advantage
of bringing catalytic units in the confined space of a nanosys-
tem in terms of inducing the cooperation between them, favor-
ing the interaction with substrates, and altering the local envi-
ronment. We will try to answer to questions like: why can a
lipophilic substrate be transformed by these catalysts even in
an aqueous environment? Why may the pH in the catalytic loci
of the nanosystem be different from that of the bulk solution
even in the presence of buffers? Why are most of these nano-
systems better than monovalent ones?
multivalent counterparts. Multivalency is a property well-ex-
ploited by natural systems to achieve astonishingly high bind-
ing constants just by summing up contributions of several units,
individually capable only of a very weak binding interaction.
Benefits of these interactions, driven by multivalency, are en-
hanced selectivity and even specificity in recognition. It is thus
not surprising that multivalent systems are able to govern cell-
cell, protein–protein, protein-cell interactions, critical processes
for the occurrence of life as we know it.
[8]
The connection of
multivalency to catalysis is obvious, because catalysis requires
the binding of the transition state of a reaction thus lowering
its energy.
[9]
Thus multivalent nanozymes, if properly designed,
may enjoy the advantage of a strong interaction with the transi-
tion state of the catalyzed reaction. Furthermore, in the catalytic
process several functional units may operate in a concerted,
cooperative
[10]
fashion, often with complementary roles. This
last aspect mimics what happens in the catalytic site of natural
enzymes. Although natural enzymes are typically not multiva-
lent species, intriguing examples of multivalent enzymes are
emerging.
[11]
The minireview discusses two classes of hydrolytic reactions:
the hydrolysis of carboxylic- and phosphoric-acid esters. Ac-
cordingly, in the different paragraphs several nanosystems per-
forming the same or similar tasks are reported. We have taken
advantage of this to highlight, whenever possible, common as-
pects and differences pertaining to each class of nanosystems
discussed.
2. Assessing the Catalytic Performance of
Nanozymes
Quite often the assessment of the catalytic performance of a
nanozyme is poorly performed and does not allow a correct