Salinamides, Antiinflammatory Depsipeptides from a Marine
Streptomycete
Bradley S. Moore,*
,†
Jacqueline A. Trischman,
‡
Dieter Seng,
†
David Kho,
†
Paul R. Jensen,
‡
and William Fenical*
,‡
Department of Chemistry, Box 351700, University of Washington, Seattle, Washington 98195-1700,
and Scripps Institution of Oceanography, University of California, San Diego,
La Jolla, California 92093-0228
Received July 22, 1998 (Revised Manuscript Received December 8, 1998)
In addition to the previously reported antiinflammatory agents salinamides A and B from the marine
isolate Streptomyces sp. CNB-091, three minor peptides are described. Their total structures were
established using a combination of spectral and chemical techniques. Revised structures are
presented for the bicyclic depsipeptides salinamides A and B on the basis of the analysis of the
dansylated salinamide A hydrolysate by chiral capillary electrophoresis. The fermentation yield of
salinamide D, which contains a D-valine residue in place of the D-isoleucine moiety in salinamide
A, can be dramatically increased 30-fold by supplementing the growth media with L-valine.
Salinamides C and E are monocyclic depsipeptides that are likely methylated byproducts of
salinamide A biosynthetic intermediates.
Introduction
Actinomycetes are a proven source of structurally
diverse secondary metabolites possessing broad ranges
of biological activities. Examples include antibiotic
(erythromycin and tetracycline), anticancer (mitomycin
and daunomycin), immunosuppressant (rapamycin and
FK506), and veterinary (thiostrepton and monensin)
agents. As the frequency of novel bioactive compounds
discovered from terrestrial actinomycetes decreases with
time, however, academic and industrial programs are
increasingly screening actinomycetes from diverse envi-
ronments for their ability to generate new metabolites.
Streptomycetes isolated from the marine environment
have been largely ignored until recently. Early reports
suggested that marine actinomycetes were derived from
terrestrial sources and that they existed as metabolically
inactive spores.
1
Consequently, the examination of ma-
rine actinomycetes was predicted to lead to a high
isolation rate of known compounds. Although known
compounds are frequently encountered, novel compounds
are being reported at a high frequency,
2,3
indicating that
marine actinomycetes have the ability to produce novel
metabolites that have the potential for development into
useful commercial products.
4,5
Recent studies have shown
that actinomycetes isolated from the marine environment
are metabolically active
6
and that certain taxonomic
groups have adapted to life in the sea.
7,8
In a preliminary communication, we reported on the
structures of the major depsipeptides, salinamides A and
B, isolated from Streptomyces sp. CNB-091, an actino-
mycete isolated from the surface of the jellyfish Cassio-
peia xamachana collected from the Florida Keys.
9
Salin-
amides A and B exhibit moderate antibiotic activity
against Gram-positive bacteria and show potent topical
antiinflammatory activity in the phorbol ester-induced
mouse ear edema assay.
9
Recently, salinamide A was
found in an edaphic Streptomyces strain (NRRL 21611),
where it was shown to exhibit strong inhibitory activity
against bacterial RNA polymerases.
10
In this paper, we
describe the entire spectrum of salinamides isolated from
Streptomyces sp. CNB-091 and amend the absolute
configurations of salinamides A and B.
Results and Discussion
Fermentation of Streptomyces sp. CNB-091 in seawater-
based media followed by double EtOAc extraction of the
whole-broth suspension, vacuum-flash chromatography,
and reversed-phase HPLC afforded predominantly salin-
amide A (1) in approximately 9% yield based on the dry
extract. Additional fermentations yielded salinamides B
(2), D (3), C (4), and E (5) in addition to the major 1.
Salinamide A (1, Figure 1) is a pale yellow noncrystal-
line solid having the molecular formula C
51
H
69
N
7
O
15
based on high-resolution fast atom bombardment mass
spectrometry (HRFABMS). Analyses by
1
H (Table 1) and
13
C (Table 2) NMR indicated that 1 is a depsipeptide
composed of seven amino acids and two non-amino acid
residues. The structures of all of the amino acids (glycine,
†
University of Washington.
‡
Scripps Institution of Oceanography.
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1145 J. Org. Chem. 1999, 64, 1145-1150
10.1021/jo9814391 CCC: $18.00 © 1999 American Chemical Society
Published on Web 01/22/1999