PHYSICAL REVIEW B 84, 075445 (2011)
Dynamics and stability of divacancy defects in graphene
Youngkuk Kim,
1
Jisoon Ihm,
1
Euijoon Yoon,
2,3,4,5
and Gun-Do Lee
2,*
1
Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Republic of Korea
2
Department of Materials Science and Engineering, Seoul National University, Seoul 151-742, Republic of Korea
3
Department of Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National
University, Suwon 433-270, Republic of Korea
4
Department of Materials Science and Engineering, WCU Hybrid Materials Program, Seoul National
University, Seoul 151-742, Republic of Korea
5
Energy Semiconductor Research Center, Advanced Institutes of Convergence Technology, Seoul National University, Suwon 443-270, Korea
(Received 4 May 2011; published 10 August 2011)
A divacancy (DV) is one of the most abundant and most important defects in irradiated graphene, which
modifies electronic and chemical properties of graphene. In this paper, we present ab initio calculations to study the
dynamics and stability of DVs in graphene. Divacancies in graphene have various reconstructed structures, such as
triple pentagon-triple heptagon (555-777) and pentagon-octagon-pentagon (5-8-5) patterns. A direct observation
of the structural transformations between these reconstructions was recorded in transmission electron microscope
images reported by Girit et al. in Science 323, 1705 (2009). We clarify the atomic structures of DVs observed
in the experiment and investigate the atomic processes and energetics for the observed dynamical motions in
great detail. It is found that a series of Stone–Wales-type transformations are responsible for the migration and
structural transformations of DVs and that a pentagon-heptagon-heptagon-pentagon (5-7-7-5) defect appearing
as an intermediate structure during the dynamical process plays an important role in the transformations of DVs.
DOI: 10.1103/PhysRevB.84.075445 PACS number(s): 61.48.Gh, 31.15.A−, 61.72.jd
I. INTRODUCTION
Since the first realization of graphene,
1–3
tremendous efforts
have been made to explore its physical properties as well as
the potential applications in industries. Unique properties of
graphene, such as ultrahigh electron mobility,
2,4,5
high thermal
conductivity,
6
and extreme mechanical properties,
7
have been
examined, and it is now widely accepted that graphene is one
of the most promising materials for future electronic devices.
Another exciting aspect of graphene-based materials is that
their exotic properties can be enriched by atomic-scale defects
engineering.
8–12
Defects engineering of graphene can enor-
mously extend the scope of applications, making graphene-
based industry more plausible and promising. Indeed, chem-
ical modifications, for example, by molecular doping
13–15
or
functionalization,
16,17
are popularly suggested, and producing
atomic vacancies by ionic irradiations
18,19
is also a promising
way to modify properties of graphene. In particular, recently
developed high-resolution transmission electron microscopy
(TEM) is very useful to prove carbon-based materials. Since
electron irradiation is a highly effective method to introduce
various types of structural defects in graphene, many TEM
studies are reported on defective graphene systems.
20,21
For
example, a recent TEM study by Cretu et al.
22
has shown that
the graphene properties can be tailored by reconstructed point
defects. They have pointed out the importance of divacancies
(DVs) due to their abundance at room temperature. The
existence of DVs has also been predicted by other theoretical
calculations showing the formation energy is lower than that
of two isolated monovacancies (MVs),
23,24
and the MVs have
a tendency to coalesce to a DV.
24,25
Recently, Girit et al. has reported the real-time dynamics
of carbon atoms in defected graphene using the aberration-
corrected TEM technique.
26
The subatomic resolution of the
TEM images allows the direct observation of carbon atoms
in graphene and provides clear images depicting the edge
structure of graphene. Furthermore, the TEM images from the
supplementary movie S1 (“the TEM images” from now on) in
the report happen to show various structural forms of DVs and
their dynamics. These contain crucial clues to understanding
the structural change of DVs. Since the dynamics of DVs
and their possible control are critical issues for graphene
applications, we perform first-principles calculations in this
paper to provide plausible explanations for the stability and
dynamics of the DV.
We first inspect the movie S1 and choose eight consecutive
frames in which we presume that important information for
the dynamics of DVs is recorded. Then we analyze those
frames manifesting their atomic structures. Using ab initio
computational methods, we investigate energetically favorable
diffusion pathways corresponding to the dynamics observed
in the frames and provide associated energy barriers. The
microscopic mechanism is also provided for various types
of migrations of triple pentagon-triple heptagon (555-777)
and pentagon-octagon-pentagon (5-8-5) defects. Our results
show 555-777 and 5-8-5 defects can migrate and rotate
in the graphene plane through a sequence of Stone–Wales
(SW)-type transformations. Since a specific motion of DVs has
its own mechanism with distinct energy barriers, there exists
a possibility to control the types of DVs produced depending
on the energy of incident electrons in a TEM experiment.
27
II. COMPUTATIONAL METHOD
The ab initio total energy calculations are performed with
the plane-wave-basis-set VASP code
28
using a rectangular
periodic supercell containing 126 carbon atoms with a single
DV. The plane-wave basis is used with a kinetic energy
cutoff of 400 eV. We use projector augmented wave (PAW)
075445-1 1098-0121/2011/84(7)/075445(5) ©2011 American Physical Society