Tumbling and Deformation of Isolated Polymer Chains in Shearing
Flow
Indranil Saha Dalal, Alex Albaugh, Nazish Hoda, and Ronald G. Larson*
Department of Chemical Engineering, University of Michigan, Ann Arbor, Michigan 48109, United States
ABSTRACT: Using Brownian dynamics simulations of
polymer chains over a wide range of resolution, we find
universal scaling laws for polymer coil dimensions and
tumbling time. At high shear rates γ̇ , the coil thickness in
the gradient direction becomes independent of chain length,
scaling as N
K
0
γ̇
-1/4
, where N
K
denotes the numbers of Kuhn
steps, and the tumbling time scales as N
K
γ̇
-3/4
, correcting
scaling laws presented in prior studies. We find this to be a
consequence of the formation of loops whose length is limited
by the time required to stretch them and derive scaling laws
from a balance of convection and diffusion of monomers. We
find that, in the absence of hydrodynamic interaction (HI) and
excluded volume (EV), for wormlike chains, the shrinkage in chain stretch observed at ultrahigh shear rates is pushed out to
arbitrarily high shear rates if the chain is resolved increasingly finely below the persistence length. Finally, scaling laws in the
presence of excluded volume and hydrodynamic interactions are derived that are expected to be valid for long chains at high
shear rates.
■
INTRODUCTION
The dynamics of isolated flexible and semiflexible polymer
chains in shear flow has attracted considerable attention and is
thought to be well understood as a result of single-molecule
imaging of DNA molecules
1-3
and Brownian dynamics
simulations.
4,5
These studies have shown that the average
molecular extension of a polymer chain in the flow direction
(x) increases with shear rate (γ̇ ) and reaches a plateau at high
shear rates. The failure to reach full extension at high shear
rates is a consequence of repeated end-over-end tumbling of
the polymer molecule, due to the equal strength of the
extensional and rotational components in a shear flow. The
plateau of polymer extension at high shear rate was assumed to
be the asymptotic response at high shear rates, until some
recent simulations,
6,9,12
performed over a wide range of shear
rates, revealed a highly nonmonotonic response in chain
stretch. Quite surprisingly, without excluded volume (EV) and
hydrodynamic interactions (HI), the average chain stretch was
shown to reach a maximum and then decrease at the highest
shear rates. (This effect almost vanished in the presence of EV
but became more pronounced again when both HI and EV
were included.
6
) We show in what follows that this non-
monotonic behavior disappears in the absence of EV and HI
when a bending potential is included in the chain model to
represent more accurately the behavior of a semiflexible
wormlike chain, such as double-stranded DNA or other
biopolymers.
In addition, coarse-grained simulations
7,8
have indicated that
the tumbling time decreases with shear rate as γ̇
2/3
at high shear
rates, which was further confirmed by a theoretical analysis.
11
For a DNA chain, the measured tumbling time approximately
followed this power law for shear flows with Wi > 10,
7,8
where
Wi is the Weissenberg number, which is the product of shear
rate γ̇ and the relaxation time of the polymer chain. It seems
doubtful, however, that results using coarse-grained chains will
be accurate at high shear rates, where small subsections of the
chain are excited by the flow and perturbed away from
equilibrium. Using a fine-grained bead-rod model, we obtain a
more accurate scaling law for the tumbling time, and derive this
law theoretically, in what follows. At high shear rates, in the
absence of EV and HI, the bead-rod model shows that radius
of gyration of the chain in the flow gradient direction (R
gy
)
scales with shear rate as R
gy
∼ γ̇
-1/4
.
5
A Graetz-Le ̀ vê que
analysis in that study was consistent with this shear-rate scaling
but also predicted a scaling with chain length, as R
gy
∼ N
K
1/4
,
where N
K
is the number of Kuhn steps in the chain. We show
below, however, that this latter prediction is incorrect and
derive the correct result from a new physical picture of the
chain dynamics under fast shearing flow.
In this article, we resolve the physics for both the
deformations and tumbling dynamics of chains over a wide
range of chain lengths in steady shear flow using both fine-
grained and coarse-grained models, encompassing both slow
and fast shearing. The results are explained using simple
balances of diffusion and convection of chain segments. In the
absence of HI and EV, at high shear rates, chain deformations
depend on the discretization level of the chain model; for
insufficiently discretized models there is a decrease in chain
Received: July 11, 2012
Revised: November 8, 2012
Published: November 27, 2012
Article
pubs.acs.org/Macromolecules
© 2012 American Chemical Society 9493 dx.doi.org/10.1021/ma3014349 | Macromolecules 2012, 45, 9493-9499