Soil Biology and Biochemistry 151 (2020) 108036
Available online 8 October 2020
0038-0717/© 2020 Elsevier Ltd. All rights reserved.
Mineralization of organic carbon and formation of microbial biomass in
soil: Effects of clay content and composition and the mechanisms involved
Fatemeh Rakhsh
a, *
, Ahmad Golchin
a
, Ali Beheshti Al Agha
b
, Paul N. Nelson
c
a
Soil Science Department, Faculty of Agriculture, University of Zanjan, Zanjan, Iran
b
Soil Science Department, Faculty of Agriculture, Razi University, Kermanshah, Iran
c
College of Science and Engineering, James Cook University, Cairns, Australia
A R T I C L E INFO
Keywords:
Biomass carbon
Carbohydrate
Cation exchange capacity
Oxyhydroxides
Specifc surface area
Water holding capacity
ABSTRACT
Mineralization of soil organic carbon and CO
2
emission from the soil is slowed by interactions between organic
matter and minerals. The main minerals involved are clay minerals and oxides but there is limited understanding
of their effects when combined, as occurs in soil. We aimed to determine the effects of clay content and
composition on organic carbon stabilization in soil, and the mechanisms involved. This was achieved by studying
the decomposition of alfalfa residues in artifcial soils made from quartz sand and kaolinite with and without
additions of the non-layered colloids (NLCs) goethite, manganese oxide or imogolite. The artifcial soils were
inoculated with microbes from natural soil and incubated at 23
◦
C in the dark at 60% of water holding capacity
for 180 days. With increasing contents of clay and NLCs, organic carbon mineralization decreased, whereas
carbohydrate and microbial biomass carbon contents increased. Of the NLCs, goethite had the least effect and
imogolite the greatest effect on carbohydrate content. The effects of the treatments on mineralization and car-
bohydrate content were explained mostly by specifc surface area (> 83% of variation), presumably due to the
effects on sorption. The effects of the treatments on microbial biomass were related to the volume of habitat
(water-flled pore space) and availability of substrate (infuenced by sorption). These results showed that clay
content and composition infuenced the stabilization of soil organic carbon mostly through the supply of surfaces
for sorption reactions rather than via interactions unique to particular colloids.
1. Introduction
Decomposition of organic matter in terrestrial ecosystems is a major
source of atmospheric CO
2
(Heimann and Reichstein, 2008; Schmidt
et al., 2011). CO
2
accounts for 60% of the greenhouse effect and con-
cerns about global climate change have increased interest in clarifying
our understanding of organic matter decomposition and retention in
soils (Kleber et al., 2011; Cotrufo et al., 2015). Decomposition is slowed
through the interaction of organic matter with soil mineral particles
(Baldock and Skjemstad, 2000a; Kalbitz et al., 2003; K¨ ogel-Knabner
et al., 2008). Stabilization of organic matter in this way also supports
plant growth and other soil functions, due to the positive impact of
organic matter on the physical, chemical, and biological properties of
soil. One mechanism of interaction is the sorption of organic matter,
which has been shown to decrease its availability for microbial
decomposition and signifcantly reduce carbon mineralization rates
(Sollins et al., 1996; Guggenberger and Kaiser, 2003).
Phyllosilicate clays and metal oxides (including oxyhydroxides, hy-
droxides and hydrous oxides) are important minerals for stabilizing
organic matter in soils and for retarding the mineralization of organic
carbon (Mikutta et al., 2007; Saidy et al., 2012). It is typically diffcult to
remove organic matter absorbed to mineral surfaces, indicating strong
organic matter-mineral bonds (Butman et al., 2007; Kaiser and Gug-
genberger, 2007). Therefore, organic matter absorbed to clay minerals
and metal oxides decomposes more gradually and to a lesser extent than
free organic matter (Mikutta et al., 2007; Schneider et al., 2010). Hy-
drous Fe and Al oxides are particularly effective in the absorption and
stabilization of organic matter in soils (Kaiser and Guggenberger, 2003;
Kaiser et al., 2007; Goodrick and Nelson, 2018). For example, complexes
of organic matter-ferrihydrite have been observed to play a key role in
immobilizing water soluble organic matter and protecting it against
microbial decomposition (Eusterhues et al., 2011; Henneberry et al.,
2012). Metal oxides have a major impact on soil properties and are
ubiquitous in soils. They can have high surface area and tend to be most
* Corresponding author.
E-mail address: rakhsh.fatemeh@znu.ac.ir (F. Rakhsh).
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Soil Biology and Biochemistry
journal homepage: http://www.elsevier.com/locate/soilbio
https://doi.org/10.1016/j.soilbio.2020.108036
Received 14 May 2020; Received in revised form 28 September 2020; Accepted 2 October 2020