Aquation of the Ruthenium-Based Anticancer Drug NAMI-A: A Density Functional Study
Neva Bes ˇker, Cecilia Coletti, Alessandro Marrone, and Nazzareno Re*
Dipartimento di Scienze del Farmaco, UniVersita ` degli Studi “G. D’Annunzio”, I-66100 Chieti, Italy
ReceiVed: January 16, 2008; In Final Form: February 20, 2008
We carried out density functional theory (DFT) calculations to investigate the thermodynamics and the kinetics
of the double aquation reaction of the anticancer drug NAMI-A. Three explicit water molecules were included
in the calculations to improve the PB solvation energies. Our calculations show that the chloride substitution
reactions on the considered Ru(III) octahedral complex follow a dissociative interchange mechanism, I
d
, passing
through a loose heptacoordinate transition state. We calculated an activation enthalpy and free energy for the
first aquation step of 101.5 and 103.7 kJ mol
-1
, respectively, values that are in good agreement with the
available experimental results. The activation enthalpy and free energy for the second aquation step were
found significantly higher, 118.7 and 125.0 kJ mol
-1
, again in agreement with the experimental evidence
indicating a slower rate for the second aquation.
Introduction
In attempts to find a new, metal-based anticancer drug with
activity complementary to cisplatin, several ruthenium com-
plexes have recently been investigated for their antitumor
activity.
1-4
Among them, some ruthenium(III) complexes,
designed on the model of cisplatin, have demonstrated favorable
antitumor properties toward a number of in vitro and in vivo
tumor models while showing lower systemic toxicity than
platinum(II) compounds.
1-4
In particular, Keppler-type complexes (HL)[trans-RuCl
4
L
2
]
with L as a heterocyclic nitrogen ligand
5-7
and the related
tetrachlororuthenium(III) dmso complexes of the type (X)[trans-
RuCl
4
(dmso-S)L] (L ) imidazole; X ) Na or HL, NAMI or
NAMI-A, respectively)
8-9
have shown interesting antimetastatic
properties. NAMI-A is the first ruthenium antitumor complex
that has entered clinical testing and has recently successfully
completed a phase I trial.
9c
The spectrum of the antitumor action
of this complex differs significantly from that of cisplatin and
presents an important antimetastatic rather than citotoxic activ-
ity.
8,9
Although the mechanism of action of the NAMI-A-type
complexes (HL)[trans-RuCl
4
(dmso-S)L] is not yet understood,
they appear to be prodrugs that hydrolyze rapidly in vivo,
forming a number of potentially active species.
10-12
The
investigation of the hydrolytic properties of this type of complex
is therefore important for determining the nature of the active
species and could be useful to optimize the protocols for the
administration of the drugs.
NAMI-A is a hexacoordinate complex with pseudooctahedral
geometry showing a square-planar arrangement of the four
chlorides and the remaining dmso and imidazole ligands in the
axial positions (Figure 1). In physiological conditions, it has
been shown to undergo a hydrolysis reaction in which up to
two chloride ligands are substituted by water leading to more
reactive aquated species.
10-12
A deeper insight into the aquation of NAMI-A is important
to understand its mechanism of action in vivo and may be useful
to design new ruthenium-based anticancer drugs. To this end,
we carried out density functional theory (DFT) calculations to
investigate the thermodynamics and the kinetics of NAMI-A
aquation (see Scheme 1). Although ruthenium antitumor com-
pounds have been the subject of intense experimental research,
very few quantum mechanical studies have been performed,
either at semiempirical level
13a
or on a specific organometallic
ruthenium complex.
13b
While the manuscript was in preparation,
a theoretical study, the first one to the best of our knowledge,
on the hydrolysis of NAMI-A was published by Chen et al.
14
However, that study presented a disagreement between the
calculated activation enthalpy for the second aquation step, lower
than the value for the first aquation step, and the experimental
evidence showing a slower rate for the second step
12
and
attributed to the inaccuracy of the employed solvent model.
Moreover, our study has been carried out at significantly higher
level of theory: we performed geometry optimization and
transition state search in solution, using also diffuse functions
on both ruthenium and main group atoms, and considered three
explicit water molecules to account more accurately for specific
hydrogen bond interactions between the ruthenium ligands
including the leaving chloride anion and the solvent.
Computational Details
All calculations were performed with the Jaguar 6.0 quantum
chemistry package,
15
using density functional theory (DFT) with
the B3LYP hybrid functional,
16
which is known to give good
descriptions of reaction profiles for transition metal-containing
compounds.
17
The 1s-4d core electrons of the ruthenium atom
were described with the Hay and Wadt core-valence relativistic
effective core potential (ECP),
18
leaving the outer electrons to
be treated explicitly by a basis set of double- quality plus one
* To whom correspondence should be addressed. E-mail: nre@unich.it.
Tel.: +3908713554603. Fax: +3908713554614.
3871
2008, 112, 3871-3875
Published on Web 03/11/2008
10.1021/jp800411g CCC: $40.75 © 2008 American Chemical Society